Pairwise Alignments

Query, 541 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 487 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 84.3 bits (207), Expect = 9e-21
 Identities = 134/550 (24%), Positives = 222/550 (40%), Gaps = 81/550 (14%)

Query: 1   MKRNWLSYMCMAALFSGALTSCNESSFLNLSDPNYFTE---SNFWKDKADAESALAAAYS 57
           MK   L    + AL  G + +C++     + D   F++    NF   +   +S L AAY+
Sbjct: 1   MKTMKLLKYSLIALVLGMMCACSD-----VLDEELFSQMAPENFLTTQEGIKSTLDAAYA 55

Query: 58  PIKGAMYGYFGAFDGWLNLNGRGDDIY--TIKGEEVPMWNIANFLNSPSTG---NDPYGA 112
             +G + GY  +     N+     DI   T  GE      + NF    S G    D +  
Sbjct: 56  --EGYLNGY--SHHSVRNIEEWCTDIEWETGGGENRTAVLMINFTWDASVGWMYGDMWLK 111

Query: 113 LYSGIQRANIVLRYIDQIPASGITEEDRSMIKGEALFLRGYQYFLLVNNYKEVPLRLIPS 172
            Y  I+ AN+VL   + + A+ I ++ +     EA F+R   Y+ L   +  VPLR  P 
Sbjct: 112 PYRAIRNANVVL---ENVEAANIGDDLKQTYAAEARFIRALSYYYLHTWFGPVPLRQSP- 167

Query: 173 NEDETNKAAATEAALWAQVEEDLDNAIKCNLPVE-RSTAKERITKGAAIAMLGKVYATQH 231
            ED+   A  +E  +   VE +L  A+  +LP   +  A  R   G A A+L K Y    
Sbjct: 168 -EDDIYLARPSEEEMRQFVESEL-LAVIPDLPAPGQEQAYGRANNGGARALLTKFYLNTK 225

Query: 232 KYPEAKQLLGTLLKAPYSYELMDNFEKNFTNEEEFNKESVFELAYSPDGDYSWSNESGIC 291
           ++ +A  +   ++     Y L  ++   F  E E N E +      P+     S  +   
Sbjct: 226 QWQKAADMAQEVMDMG-DYSLYPDYAMLFRVENEQNSEFILTYPQIPN-----SPGNNYI 279

Query: 292 LGCYIPQFIGPVKSGGWAKLMPNSLIVGEFTKETRPSDADTKFDKRMYASLFFDAANYGD 351
            G +   F    K+G              F    R   A      R+Y S F+++   GD
Sbjct: 280 NGAFPEGFASDPKTG------------LTFLNSWRNWAA----QYRLYDS-FYNSFEEGD 322

Query: 352 KVPNEKWYGNNYSMDDLWEGNEGKMAGGAPSFNVNGTAGKFLIKKNTAYYVDDKAPDNMG 411
                        MD + +             N  G A   L   NT  +     P+ +G
Sbjct: 323 A-----------RMDLIMDS----------YINGQGNAVSLLNNNNTRSFKYWPDPNGLG 361

Query: 412 NKEGRSSNLRVMRFAEVLLLYAEACAKTNDPDGANYAL-KQIRQRAGLTEKTF----AQA 466
           N+ G  +++  +R+A++LL  AEA  + N P+  +  L   +R+RA L         + A
Sbjct: 362 NEHG--NDVPAVRYADILLSRAEALNELNGPNQESIDLINMVRERADLEPLELSDFTSMA 419

Query: 467 ELMNEIEHQCLLEFFAEGHRFDDLKRWYSPSEIQLIFKANGKQGAENFQEKHLYYPIPTS 526
           +L   + ++   EF++EG R +D  R      +     +   +G  N +  H+ +PIP +
Sbjct: 420 QLRTHLLNERAWEFYSEGKRREDQIR------MGTFVSSAVARGVTNAKPTHVLFPIPQA 473

Query: 527 ELNNNTAMEQ 536
            L+ N  + Q
Sbjct: 474 ALDANEMLVQ 483