Pairwise Alignments

Query, 541 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 558 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 135/566 (23%), Positives = 223/566 (39%), Gaps = 85/566 (15%)

Query: 10  CMAALFSGALTSCN----ESSFLNLSDPNYFTESNFWKDKADAESALAAAYSPIKGAMYG 65
           C   L    L SC     E    N+ D       N+    +     + AAYS  +     
Sbjct: 17  CSLGLGMALLPSCEGVLEEEVIANIGD-------NYMNTPSGLRDGVNAAYSTFRS---- 65

Query: 66  YFGAFDGWLNLNGRGDDIYTIKGEEVPMWNIANFLNS---PSTGN--DPYGALYSGIQRA 120
           ++G   G  N    G D YT   +    W   N   S   P TG+  + +   Y+GI   
Sbjct: 66  FYGTERG-NNFTIFGTDTYTNGADG--SWKFMNQYTSQFDPRTGHVREVWNNFYTGINTC 122

Query: 121 NIVLRYIDQIPA-SGITEEDRSMIKGEALFLRGYQYFLLVNNYKEVPLRL----IPSNED 175
           N V   ID+ PA +G+ E  ++    EA F+R + YF+L  ++  V L+L    +P+NE 
Sbjct: 123 NAV---IDRAPAVTGLEESLKTQYIAEAKFIRAHHYFVLTQHFGGVDLQLSETVVPTNE- 178

Query: 176 ETNKAAATEAALWAQVEEDLDNAIKCNLPVERSTAKERITKGAAIAMLGKVYATQ----- 230
                 A+ A ++  +  DL+ AI    P  R+++  + T+ AA  +LG VY T+     
Sbjct: 179 ---VGRASLADMYTAIIADLEAAIPDLEPTMRASSYGKATRPAAEHLLGLVYLTKGYSDA 235

Query: 231 ---HKYPEAKQLLGTLLKAPYSYELMDNFEKNFTNEEEFNKESVFELAYSPDGDYSWSNE 287
                +  A+     ++   Y ++L+ +F   +    E N E +F + Y+ D     +N 
Sbjct: 236 SEGSDFSNAESYFQKVID-DYGFQLLPDFADVYAFGNEINDEVIFSIQYTRD---PLTNG 291

Query: 288 SGICLGCYI-------PQFIGPVKSG-GWAKLMPNSLIVGEFTKETRPSDADTKFDKRMY 339
            G     Y        P     V +G  W +  P +  + +        D D ++ K  +
Sbjct: 292 GGNNTHLYFLMEYDVQPGMQRDVANGRPWKRYRPTAYTLNQAFVN---RDVDARYQK-SF 347

Query: 340 ASLFFDAANYGDKVPNEKWYGNNYSMDDLWEGNEGKMAGGAPSFNVNGTAGKFLIKKNTA 399
            ++F+ + N GD       +  + S     EG+      G         A  + I   + 
Sbjct: 348 KNVFY-SNNPGD---YNTTFDLSKSTVSFAEGDTAIYIPGYEIPEAERAAKPYQILTPSM 403

Query: 400 Y----------YVDDKAPDNMGNKEGRSSNLRVMRFAEVLLLYAEACAKTNDPDGANYAL 449
           Y          ++D    D    + GR  +    R A+  L+ AEA  + +  D A   +
Sbjct: 404 YTDKLYPTLNKHLDPGRQDKTQAEGGR--DYIAFRLADTYLMLAEAQFQQDKIDEALENI 461

Query: 450 KQIRQRAGL----TEKTFAQAELMNE-IEHQCLLEFFAEGHRFDDLKRW-YSPSEIQLIF 503
             IR+RA       E     AEL  E I  +   E   E  R+ DL RW      +Q+  
Sbjct: 462 NMIRRRAAWPGKEAEMEITSAELNLEFIMDERARELLGEQKRWMDLARWGVLVERVQMYN 521

Query: 504 KANGKQGAENFQEKHLYYPIPTSELN 529
           +A    G+ N +  H+  PIP  +++
Sbjct: 522 EA----GSPNIKATHILRPIPQDQID 543