Pairwise Alignments

Query, 1021 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1051 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  546 bits (1408), Expect = e-159
 Identities = 351/1047 (33%), Positives = 544/1047 (51%), Gaps = 76/1047 (7%)

Query: 18   IPL-AAQDIEIKGMVTEATTNEPLPGVTVRVKGKDTGTVTDMDGKYSIKANKGN-ILIFS 75
            +PL  AQ++ + G V +      LPGVTV +KG   GT TD  G +S+    G+  L+FS
Sbjct: 34   LPLQTAQEVTVSGRVVDEN-GSGLPGVTVVLKGTTKGTTTDATGNFSLPVPDGSGTLLFS 92

Query: 76   TIGMKQIEKAVTSGTPINVSMEEDNIALEQVVVIGYGTVKKSHLSGAVGSVSAKELNGQV 135
             IG    E  + +   +NVS+  D  ALE+VVV+GYG  KKS ++GA+ SV A +L+   
Sbjct: 93   FIGYTSQEVQINNRATVNVSLAPDTKALEEVVVVGYGEQKKSVVTGAISSVKASDLDNMP 152

Query: 136  ASNAATALQGKIPGVSVASSSGDPNGSMTINVRGISSLSNN----NPLYVVDGA--FGDI 189
             +    ALQG+  G+++ S+SG P    T+ VRG +++  N    +PLYVVDG    G I
Sbjct: 153  VTRVEQALQGRASGLTITSNSGQPGSPATVRVRGTTTIGKNPEDSDPLYVVDGVPIDGGI 212

Query: 190  SMVDPNDISSIEVLKDAAAAAIYGSRAAGGVVLITTKSGRKDMPTKLDVNFFTGVSQTPK 249
              ++ +DI+SIEVLKDAA+AAIYG+RAA GV+L+TTK G      ++  N + GV +  +
Sbjct: 213  DYLNQSDIASIEVLKDAASAAIYGTRAANGVILVTTKRGTSGK-MQVSYNGYYGVQEPWR 271

Query: 250  TLKVFNGEEYSRFARYYKLAGDGYGAENGATPFIGEGTDWQDVMLR-TAMTYKANATISG 308
             L + N  EY+       +AG G   +      +GEGTDWQ+ +    +       ++SG
Sbjct: 272  KLDLLNAREYATLYNEASVAGGG-AIKYPNPQDLGEGTDWQEAVFSDNSPIQNHELSVSG 330

Query: 309  GSKNGSYSSSVSYLNKEGILR--NTDHESYNIRLKSDYSF-----FDNRLTIGESMIVNL 361
            G +  ++ +S  Y N+EGI+   N+ +E +  R  S +       F N +       V +
Sbjct: 331  GGEKSTFYTSFGYFNQEGIVAPSNSQYERFTARFNSTHKVTKAITFGNNIGYTRISSVGV 390

Query: 362  TKGSGY-------IHQDTMFDIFQF--------PSVVPVYDPTNAGGWGTSNDIN--LPN 404
               S +       I+ D +  + +         P    V        +G SN+I+  + N
Sbjct: 391  EPNSEWGAPLTRAINMDPLTPLIETDPEKANASPYDKAVVRDPQGRPYGISNNISSEIVN 450

Query: 405  PLAEMTVNDERTETTKIFLNAYLQAEIIKGLKYKLNVGIRKEHTKWRYYKDVYDLGTFGK 464
            P+A + V+  R  + K+  NA+++ E + GL+ + ++G          +  V+ L T   
Sbjct: 451  PVAALLVDQRRGWSDKVVGNAFVEIEPLAGLRLRSSIGADLAFWGDHNFSPVFYLNTTNN 510

Query: 465  NDKPDLEEKSSTWESWVLENTLNYDRTFGKHNLSLLAGYSAQKDKSYSLYGKNGDMPQFI 524
            N + D    ++   +W+ E T  Y R+FG+HN +LL G SAQK+K  +  G    +P   
Sbjct: 511  NTQNDYTRNNNRGLNWLWEATAAYTRSFGRHNATLLVGTSAQKNKGETQGGTKSGIPV-- 568

Query: 525  ETMPGNVDPSNLKASSSLNEL---------ALVSLFGRVMYSFDDRYLFSASIRRDGSSR 575
                 ++D ++L  S    +           L S+FGRV Y++D+RYL +  IRRDGSS+
Sbjct: 569  ----SHLDDASLAFSVPTEDQFFWGGEYQNTLSSIFGRVNYNYDERYLLTGIIRRDGSSK 624

Query: 576  FRSGHQYGAFPSASIGWNINREKFFKPLENVFDQLKLRFSYGKLGNQEMTSYYPTQSVVS 635
            F   ++YG FPS S+GW  +RE FF P  ++ + LK+R SYG +GN  +  +     V  
Sbjct: 625  FGPNNKYGVFPSVSVGWVTSRESFF-PANDIVNFLKIRGSYGVVGNNRIDDFLYLARV-G 682

Query: 636  DGMNYVMNNSPWFGSMPYV--QAISPANLTWENTETYNIGLDVSLLNGRLTLTADAYVKN 693
             G NY +   P    +  V  +A+S  +L WE T   N G +  L +   TLTA+ Y K 
Sbjct: 683  GGRNYTIGYGPDLELVNGVSPEALSNPDLQWEETSQLNFGFEAVLFSD-FTLTAEYYKKK 741

Query: 694  TNDVLLPIPSTASTGISGNSIQNAGQVRNKGFELAVNYRGAIKEKFNYYIGANIAADKNE 753
            T+D+LL        G +G    N  ++ N+GFE+ + Y   I +   + +  N +  +NE
Sbjct: 742  TSDMLLQTTIPWYVGNNG-PYGNIAEMENRGFEVELGYNKTIGQ-VAFSLNGNASYLENE 799

Query: 754  VTKITLGGQNLMISGYSAHGAGGRGINMFAEGHPMSYFNLIETDGLFRSAEEIANYKNKD 813
            VT +   G           G  G  I     G P+++   ++ DG+F++ EEIA Y N +
Sbjct: 800  VTSL---GPEKEFLNRQVFGPSGEVITRIEVGKPINFLYGLKNDGIFQNEEEIATYVNSE 856

Query: 814  GELIQPAAQVGDVRYKDWNGDGKINTDDQHDVGSPFPDFTFGIRLGGEWNNFDFNLFFDG 873
            GE++QP AQ GD R  D NGDG IN+DD+  +G P PD+T+G     +W +FD  +F  G
Sbjct: 857  GEMLQPKAQPGDFRRVDVNGDGVINSDDRTMIGDPTPDWTYGFTASAKWKSFDLMVFGQG 916

Query: 874  MVGNKIYN-YPRYRLESGNFNGNMSTVLANSWRPDNQNTDIPRFSKTDGADNKWAYTDRW 932
            + GN ++    RY L+  N+    +T +   W  +  +   PR S  D   N  + +D +
Sbjct: 917  VAGNDVFQAIRRYDLQGANW----TTEVFGRWAGEGTSNTFPRLSFNDANKNFSSSSDFY 972

Query: 933  LEDGSYIRLKTLDIGYTLPKVLTKKIKLENVRIYTSMENLFTLTKYSGYTPDLGESSVAG 992
            ++DGSY R+K L +GY+LP+ L  K+ L  +R+Y +  NLFT T Y+GY P++G  S   
Sbjct: 973  VKDGSYFRIKVLQLGYSLPQNLISKVGLSRLRVYVTGNNLFTFTNYTGYDPEIGGGSF-- 1030

Query: 993  VAYNVFSRGIDQGRYPLPRTISFGIQV 1019
                    G+D+G YP  R    GI +
Sbjct: 1031 --------GVDRGIYPQARAYMAGINI 1049