Pairwise Alignments

Query, 482 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 736 a.a., Pyocin R2_PP, traC domain protein from Pseudomonas putida KT2440

 Score =  151 bits (382), Expect = 6e-41
 Identities = 98/302 (32%), Positives = 148/302 (49%), Gaps = 11/302 (3%)

Query: 26  WKQQLATDSYGNPVRSISNLRLIFTLDENLSQ-IRYDTFCQDDVCFNPL-FRNVNGNKID 83
           WK  LA    G  +  + N+ LI   DE  S  I Y+ F    +      +  V G   D
Sbjct: 327 WKDMLARTESGALIAHMQNVELILANDERWSGVIGYNAFSSKIMRLRAAPYGGVPGEWSD 386

Query: 84  EESVGKIQDYLERTYRLRLTQNKVFEILKTTSSERSFNPVQEFITQETWDGQPRIATAII 143
            + + ++  +L +   LR+  + V E +   + + +F+PV  ++ +  WD  PR+   + 
Sbjct: 387 IDDM-RVMKWLAQQ-GLRVKASHVVEAVSVVAHDNAFHPVCTYLARLEWDRVPRLERWLH 444

Query: 144 DYLGAEDMPLVREQTKLWFVAAVARVFSPGCKFDNVLTLPGPQGIGKSTFFKTISGKWFN 203
           +  G        +  K W ++AVARV  PGCK D VL L G QG GKS+    + G WF 
Sbjct: 445 EIFGVPRNEYSSKVGKRWMISAVARVMKPGCKADAVLILEGAQGAGKSSALGVLGGDWFM 504

Query: 204 DSFSFASGDKEKVETITNGWIIEISELNGLKRANDVEAAKAFLSRCSDYMRPAYGHKVVE 263
           D+  F  GDK+  + I   WI+E+ EL+   +A   + AK F S   D  R +YG +  +
Sbjct: 505 DT-PFTLGDKDAFQAIRGKWIVELGELDSFNKAESTK-AKQFFSASIDTYRESYGRRTSD 562

Query: 264 FMRHNVFAATTNETNFLQGDNGNRRWWIIPVKGNGHVSDWLDCLQHSVPQLWAEAYTYYR 323
             R  VFA TTN+  +L+   GNRR+W +       V   L+ L+ +  QLWAEA   Y+
Sbjct: 563 VPRQCVFAGTTNQDEYLKDATGNRRYWPVAC-----VKVDLEALRRARDQLWAEAMFCYQ 617

Query: 324 QG 325
            G
Sbjct: 618 AG 619