Pairwise Alignments

Query, 325 a.a., arabinan endo-1,5-alpha-L-arabinosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 540 a.a., family 43 glycosylhydrolase from Pectobacterium carotovorum WPP14

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 45/316 (14%)

Query: 26  YKNPVVNYSLPDPSVIRAEDGYFYLYAT-EDIRNLPIHRSKDLIKWESVGTAFTDETRPT 84
           Y NP++    PDP++I+  D Y+  +++ +DI  L I  S+DL+ WE +G A T      
Sbjct: 53  YLNPIIAGDHPDPTIIKDGDDYYMTFSSFDDIPGLLIWHSRDLVNWEPLGPAIT------ 106

Query: 85  FEPKGNLWAPDINKIGDKYVLYYSMS---CWGGEWTCGIGVATADKPEGPFVDHGMMFRS 141
             P   +WAPD+ K   KY +Y++ +      G     + V TAD   GP+         
Sbjct: 107 -TPVDAIWAPDLVKHNGKYYIYFTTNRIIDAKGTKKKTLYVITADDIHGPWTP------P 159

Query: 142 NEIGVQN-SIDPFY-IEDGGRKYMFWGSFRGIYGIELTADGLK-------VKSG---ADK 189
            + G++N + DP + + + G++Y+F     G   ++LT DGL        V  G    ++
Sbjct: 160 KDTGLKNPASDPGHVVGEDGKRYIF---MSGGNRVQLTDDGLSTVGEMAVVYQGWQYPEE 216

Query: 190 KQIAGTAYEGTYIHKKNGYYYLFASTGTCCEGLKSTYQTVVGRSSSLWGPYLDKQGRSML 249
             +   + EG  + +   Y+Y+  + G    G  + +  +  RS S+ GP+ +       
Sbjct: 217 WDVESFSQEGPKMLRHGDYFYMVLAEGGTA-GPPTGHMVIAARSKSINGPWENS------ 269

Query: 250 DNNHVVLIHNNKSFVGTGHNAELITDKADNDWILYHGVSVS-NPYGRVLLLDRVDW-KKG 307
            +N ++   +      +  +A LI     N +++YHG        GR  +L+ + W   G
Sbjct: 270 PHNPIIRTQDRSEKWWSRGHATLIEGPDKNWYMVYHGYENGFMTLGRQAMLEPIVWGDDG 329

Query: 308 WPVVKSSSASTESPKP 323
           W     +SA  ++ KP
Sbjct: 330 W----FTSAGFDTGKP 341