Pairwise Alignments

Query, 325 a.a., arabinan endo-1,5-alpha-L-arabinosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 486 a.a., family 43 glycosylhydrolase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 39/310 (12%)

Query: 28  NPVVNYSLPDPSVIRAEDGYFYLYATE-DIRNLPIHRSKDLIKWESVGTAFTDETRPTFE 86
           NP+V    PDP++++  D Y+  +++      L I  SKDL+ W  +G A         +
Sbjct: 2   NPIVAGDHPDPTILKDGDTYYITFSSFLSYPGLVIWTSKDLVNWSPIGPAL-------HK 54

Query: 87  PKGNLWAPDINKIGDKYVLYYSMSCWGGEWTCGIGVATADKPEGPFVDHGMMFRSNEIGV 146
           P G++WA D+ K   +Y +Y   +  G  W+  I    AD   GP+ D        ++ +
Sbjct: 55  PLGDVWAVDLVKHQGRYFIYIPANPTGKGWS--IFTIWADDIAGPWSD------PVDMKI 106

Query: 147 QNSIDPFY-IEDGGRKYMFWGSFRGIYGIELTADGLKVKSGA----------DKKQIAGT 195
           +  IDP + + + GR+Y+F     GI  + LT DGL                D       
Sbjct: 107 EGCIDPGHVVGEDGRRYLF---VNGIRKVRLTDDGLATDGAVEPAYDPWRYPDDWITENF 163

Query: 196 AYEGTYIHKKNGYYYLFASTGTCCEGLKSTYQTVVGRSSSLWGPYLDKQGRSMLDNNHVV 255
           A EG  + ++  ++YL  + G    G  + +  +  RS S+ GP+ +     ++    V 
Sbjct: 164 APEGPKLLRRGDWFYLVTAVGGTA-GPVTGHMVIAARSRSVHGPWENCPQNPLVRTQSV- 221

Query: 256 LIHNNKSFVGTGHNAELITDKADNDWILYHGVSVS-NPYGRVLLLDRVDW-KKGWPVVKS 313
               ++ +   GH A L+   A + W++YHG        GR  LL+ V+W   GW     
Sbjct: 222 ----DEPWWSRGH-ATLVEGPAGDWWMVYHGYENGFRTLGRQTLLEPVEWTADGWFRAMG 276

Query: 314 SSASTESPKP 323
              S    KP
Sbjct: 277 GDLSRSLAKP 286