Pairwise Alignments
Query, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1377 a.a., response regulator receiver domain protein from Bacteroides ovatus ATCC 8483
Score = 549 bits (1415), Expect = e-160
Identities = 406/1373 (29%), Positives = 685/1373 (49%), Gaps = 121/1373 (8%)
Query: 39 LSQNTVHAILQDKQGFMWFGTKDGLDRYDGISFRAFMK---ESGTLGNNFITSLYEDQQG 95
LS + ++A+ QD++GF+W T++GL+++DG F + +S +L NN++ +L+ED +G
Sbjct: 38 LSNSLINAVYQDRKGFIWIATENGLNKFDGTRFSIYRHNATDSTSLKNNYVRTLFEDSRG 97
Query: 96 QIWIGTDVGLYVYSPEHETV-ERFIMKSDLDTGIDYTVNLVTGDKDGGIWVVTQSQAVFY 154
WIG GL Y + E FI + D T + ++G +W+ T Q
Sbjct: 98 NFWIGCINGLQRYDRATDNFHELFISRKDGRKNPHITS--IIERRNGDLWIATSGQGAIS 155
Query: 155 YNPQTNKLINYLSDQ-SGRLKFGSLGQLYFDSDNVCWLDIRDGNLYFSKDKLQTLVPVFP 213
+N ++ + + R+ L ++ DS W+ + LY + + L
Sbjct: 156 LKKNSNPASFHIETELTDRIGSNYLNVIFEDSRQNLWIATEEKGLYRYSPESKEL----- 210
Query: 214 KDGNEPFK--GEYICKLLPGPYNCMYVGTIT-GLKEVNLTNK-TVRTLLSKDESGDDIYV 269
K P+ G+ + + + ++VGT+T GL ++ + +L ++ ++ +
Sbjct: 211 KSYKAPYHIAGDDVSAICEDAHGQIFVGTLTKGLFRLSSRQEGNFEPVLYQNRM--NLNI 268
Query: 270 REIAFYSDDELWAGTES-GLYIYNLRTKKTVHLRNVSGDPYSISDNAIYSICKDREGGIW 328
R + + +L GT+ G+ Y + V ++ P+ S + ++S+ +D++ +W
Sbjct: 269 RTLIIDTRGKLIIGTDGEGVKEYQPQQDIIVD-SEINAGPFDFSKSKVHSLIEDKDHNLW 327
Query: 329 IGSYFGGVNYYPKQYTYFDKV-YPRTEIDEMGKR-VREFCADHDGTLWIGTEDKGLFHYY 386
+G + G+ P FD Y + +G V D T+WIGT++ GL+
Sbjct: 328 LGIFQKGLILVPGISNKFDYYGYKSIHNNTIGSSCVMAIHTDEQATIWIGTDNDGLYAIN 387
Query: 387 PSTGLIEPFRHP-DIYHNVHG--LCL--DGNY-LWVGHFAKGLNRIDLRTHAVKHYFDAP 440
+ + H +V G LCL D N LW+G + GL R++ +T + DA
Sbjct: 388 DQGKQLRHYTHQAGNPQSVPGTILCLYEDSNQELWLGSYFDGLARMNKQTGTCQ---DAT 444
Query: 441 N-----------DIFSICRTTSGNLWLGTT-AGLFR----------YHSETNRFE--RVP 476
+ + I + NLW+GT +GL++ Y S N + +
Sbjct: 445 SLLQGNLNAGKPKVSCIIEDKNKNLWVGTYGSGLYKINLPTQHVTYYESTRNENDDWSIN 504
Query: 477 ELGWVFIYNIKEDKQGNLWLATYIDGVYKRNVRTGEWEHYMHDETNPSSLPSNKVLSIFE 536
L +I + EDK+G +W+ TY G+ N +T + +Y + LP V S+ E
Sbjct: 505 RLPNDWISYLLEDKEGMIWIGTY-KGLAVLNPQTDNFINYKKQN---NLLPGYVVYSLLE 560
Query: 537 DSQNQLWFTTQGGGFC----RFDPSGKIFVRYDSSIGLPSNVVHRIEEDEKGLFWITTNK 592
S ++W T G C R P V + ++ GLPS+++ + EDEK WI+T++
Sbjct: 561 SSNGEIWAGTSEGLVCLNKDRLTP-----VLFTTADGLPSDIICGLAEDEKKNIWISTHQ 615
Query: 593 GLVHFNPKTLEFKVYTIANGLLSNQFNYQSSYKDKNGRIYFGSINGFISFEPSVFVDNDF 652
G+ NP +F Y +GL N+F + +KDK G+I+FG NG +F P +
Sbjct: 616 GISKLNPPEKKFINYYAGDGLQGNEFTRTAVFKDKRGKIFFGGTNGVTAFYPQDITEIKK 675
Query: 653 LPPVVITDFMLFNKKVPVG--STDSPLKQSITL-SDYLELQSNQNSFSFSVAALSYQSPD 709
V+IT F + N+ V G S ++ + + + ++ L N+N+FS + L + +PD
Sbjct: 676 EMNVLITGFHVANRPVKKGDKSGNNVITDTAVMDTEQFTLAYNENTFSIDFSVLEFSNPD 735
Query: 710 MNTVLYKLEGYDSEWYSV--GKNLITYSNLPYGTYVLKVKAANSDGIWNPDVRTLKIRIL 767
+ YK++ EW S G N +TYS+L G Y V+A + + N +RT+ I I
Sbjct: 736 RISYQYKIKELGDEWISTQPGTNRVTYSSLKPGKYTFSVQARDHNNFSN--IRTVTIAIT 793
Query: 768 PPFYLSVWAYIIYVILILGALFATFFYFRKRAVEKHQRAMEKFEQEKERELYTSKIEFFT 827
PP+Y + WA +I+ L ++A Y R +H++ E Q+ ++ +K++FF
Sbjct: 794 PPWYQTWWAKVIWGCLGALLIYALTMYILSRI--RHRQ--EVMRQKHMEQINEAKLQFFI 849
Query: 828 NVAHEIRTPLTLIKSPLESVLTEKELPENVKMELEIMDQNAERLLNLTNQLLDFRKTENK 887
N++HEIRTP+TLI SPLE +L E + V + ++ +NA+R+L L NQL+D RK +
Sbjct: 850 NISHEIRTPMTLIISPLEKLLAEHSEKQPVYL---MIYRNAQRILRLINQLMDIRKLDKG 906
Query: 888 GFKLNPVECSVGSIIRSVYKRFTTLVNQKGIELKVEIPEE---ELLASVDKEALTKILSN 944
L E + I + + F +K I E E L +D K+L N
Sbjct: 907 QMHLKFRETDIVGFINDLMQTFNYQAQKKNITFTFEKELEGADSLKVWIDLNNFDKVLMN 966
Query: 945 LFTNALKYAQTYAYLSLSVDEAGKE---------FTIVMSNDGKIIPIEMRENIFRPFVQ 995
+ +NA KY + +S+ + F I ++++G I E IF F Q
Sbjct: 967 VLSNAFKYTHEGGNIEVSLKTGHNDAYRGALKDYFEIDITDNGIGIDKNKIEQIFERFYQ 1026
Query: 996 Y-RDGKDIVPGTGIGLALARSLAELHQGTLTMD--QDMECNRFILSIPIRHQTASDVLEE 1052
D GTGIGL L+RSL ELH G + + +D + RF++ +P+ S+ L+
Sbjct: 1027 IDNDMTQSNFGTGIGLHLSRSLVELHHGIIKAENREDGQGTRFVIRLPL----GSNHLKA 1082
Query: 1053 EHREKP----------------VYD-EEDNETRIMPSDKDKKEVASVLIVEDNKDMLAFV 1095
E E P +Y+ EE+N+T K K VLIVED++++ ++
Sbjct: 1083 EELENPEETGSEPTISQLPKDSIYETEEENKTNEYRKPKAKTRYR-VLIVEDDEEIRRYI 1141
Query: 1096 ARQLSPLYHVITAENGIEALKVLEHEYINLVISDIMMPEMDGLELCEHLKSNLDYSHIPI 1155
+L + + NG E L+ + E +LVISD+MMPEMDG+ LC +K N++ +HIPI
Sbjct: 1142 RSELDSDFRIYECTNGREGLETILKEKPDLVISDVMMPEMDGITLCRKIKQNININHIPI 1201
Query: 1156 ILLTAKTTLESKIEGLEQGADAYIEKPFSVEYLRVNVANLLSNRERLRRRFIESPFI--K 1213
ILLTAK+ E +IEGLE GADAYI KPF+ E LR ++NL++NRERLR + + + K
Sbjct: 1202 ILLTAKSKAEDQIEGLEIGADAYIVKPFNTELLRTTISNLIANRERLRGKLVGEQQVEEK 1261
Query: 1214 ADTMAQTKADEVFIQKLNEYVSQHLDNTDLVIDDMAEAMNMGRSNFYRKLKGVLDMSPNE 1273
+ DE+ + K+ + ++ HL + L ++ +A + M R + +RKLK + + S +
Sbjct: 1262 ITKIEMKSNDEILMSKVMKTINDHLADPTLNVEMLAANVGMSRVHMHRKLKELTNQSARD 1321
Query: 1274 YLRLIRLKKAAQLLKDGRYGIVEISYMVGFNSPSYFSNCFKKQFGVLPKDFMQ 1326
++R IRLK+AA LL++ + E++Y GF++ S+FSN F+ +G+ P ++ +
Sbjct: 1322 FIRSIRLKQAANLLREKNLSVSEVAYATGFSNLSHFSNTFRDFYGISPSEYKE 1374
Score = 72.4 bits (176), Expect = 3e-16
Identities = 83/339 (24%), Positives = 142/339 (41%), Gaps = 29/339 (8%)
Query: 28 YAFRSLDINNGLSQNTVHAILQDKQGFMWFGT-KDGLDRYD--GISFRAFMKESGTLGN- 83
Y ++S+ NN + + V AI D+Q +W GT DGL + G R + ++G +
Sbjct: 348 YGYKSIH-NNTIGSSCVMAIHTDEQATIWIGTDNDGLYAINDQGKQLRHYTHQAGNPQSV 406
Query: 84 -NFITSLYEDQQGQIWIGTDV-GLYVYSPEHETVE--RFIMKSDLDTGIDYTVNLVTGDK 139
I LYED ++W+G+ GL + + T + +++ +L+ G V+ + DK
Sbjct: 407 PGTILCLYEDSNQELWLGSYFDGLARMNKQTGTCQDATSLLQGNLNAG-KPKVSCIIEDK 465
Query: 140 DGGIWVVTQSQAVFYYNPQTNKLINYLSDQS-------GRLKFGSLGQLYFDSDNVCWLD 192
+ +WV T ++ N T + Y S ++ RL + L D + + W+
Sbjct: 466 NKNLWVGTYGSGLYKINLPTQHVTYYESTRNENDDWSINRLPNDWISYLLEDKEGMIWIG 525
Query: 193 IRDGNLYFSKDKLQTLVPVFPKDGNEPFKGEYICKLLPGPYNCMYVGTITGLKEVNLTNK 252
G + QT + K N G + LL ++ GT GL +N
Sbjct: 526 TYKGLAVLNP---QTDNFINYKKQNNLLPGYVVYSLLESSNGEIWAGTSEGLVCLNKDRL 582
Query: 253 TVRTLLSKDESGDDIYVREIAFYSDDE---LWAGTESGLYIYNLRTKKTVHLRNVSGDPY 309
T + D DI I ++DE +W T G+ N KK ++ +GD
Sbjct: 583 TPVLFTTADGLPSDI----ICGLAEDEKKNIWISTHQGISKLNPPEKKFINY--YAGDGL 636
Query: 310 SISDNAIYSICKDREGGIWIGSYFGGVNYYPKQYTYFDK 348
++ ++ KD+ G I+ G G +YP+ T K
Sbjct: 637 QGNEFTRTAVFKDKRGKIFFGGTNGVTAFYPQDITEIKK 675
Score = 38.9 bits (89), Expect = 3e-06
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 564 YDSSIGLPSNVVHRIEEDEKGLFWITTNKGLVHFNPKTLEFKVYT-IANGLLSNQFNY-Q 621
Y + L +++++ + +D KG WI T GL F+ F +Y A S + NY +
Sbjct: 32 YSTDKELSNSLINAVYQDRKGFIWIATENGLNKFD--GTRFSIYRHNATDSTSLKNNYVR 89
Query: 622 SSYKDKNGRIYFGSINGFISFE 643
+ ++D G + G ING ++
Sbjct: 90 TLFEDSRGNFWIGCINGLQRYD 111