Pairwise Alignments

Query, 447 a.a., preprotein translocase SecY subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 446 a.a., Preprotein translocase SECY subunit from Agrobacterium fabrum C58

 Score =  338 bits (867), Expect = 2e-97
 Identities = 176/431 (40%), Positives = 272/431 (63%), Gaps = 11/431 (2%)

Query: 13  KIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLAKLHEQTSEGLLALLNMFSGGAFSN 72
           K EDL++R+  T+  + +YR G+++ LPG+NP   A+     + G+L L NMF+GGA   
Sbjct: 19  KAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANGILGLFNMFAGGAVER 78

Query: 73  ASIFALGIMPYISASIVIQLLGIAVPYFQKLQREGESGRRKMNQYTRYLTIAILLVQAPS 132
            +IFALGIMPYISASI++QL+   VP  + L++EGE+GR+ +NQYTRY T+ +  +QA  
Sbjct: 79  MAIFALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKIINQYTRYGTVLLGTLQAYG 138

Query: 133 YLLNLKMQAGPSLNASLDWTLFMVTSTIILAAGSMFILWLGERITDKGIGNGISFIILIG 192
             + L+   G  ++  +    F V++ I L  G+MF++WLGE+IT +GIGNGIS II  G
Sbjct: 139 IAVGLESGNGLVVDPGM---FFRVSTVITLLGGTMFLMWLGEQITSRGIGNGISLIIFAG 195

Query: 193 IIARFPDALIQEV-VSRVANKSGGLIMFIIEVVFLLLVIGAAILLVQGTRKIPVQYAKRI 251
           I A  P AL   + + R    S  LI+ +  V+  + VI   + + +  R++ +QY KR 
Sbjct: 196 IAAGLPKALAGTLELGRTGALSTPLILMV--VIVAIGVIALIVFVERAQRRLLIQYPKRQ 253

Query: 252 VGNKQYGGARQYIPLKVNAAGVMPIIFAQAIMFIPITFIGFSNNVN--NAGGFLHAFTDH 309
           VGN+ + G   ++PLK+N AGV+P IFA +++ +P T  GF+ N N       + A   H
Sbjct: 254 VGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNTNLPTWATSIIASLQH 313

Query: 310 TSFWYNFVFAVMIILFTYFYTAITINPTQMAEDMKRNNGFIPGIKPGKKTAEYIDDIMSR 369
               +  ++ ++I  F +FYTAI  NP   A+++K++ GFIPGI+PG++TAEYID +++R
Sbjct: 314 GQPLFMALYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTR 373

Query: 370 ITLPGSFFLALVAIMPAFAGIFGVQAGFAQFFGGTSLLILVGVVLDTLQQVESHLLMRHY 429
           IT+ G+ +L  V I+P        + G     GGTSLLI+V V LDT+ Q++ HL+ + Y
Sbjct: 374 ITVVGAIYLVFVCILPE---TLIARTGIPLALGGTSLLIVVSVTLDTVAQIQGHLIAQQY 430

Query: 430 DGLLKSGRIKG 440
           +GL+K  +++G
Sbjct: 431 EGLIKKSKLRG 441