Pairwise Alignments

Query, 604 a.a., DNA mismatch repair protein mutS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 604 a.a., DNA mismatch repair protein MutS from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  369 bits (947), Expect = e-106
 Identities = 207/611 (33%), Positives = 351/611 (57%), Gaps = 24/611 (3%)

Query: 2   EKQENIIATYQQIIQETEQQLQKARKRIRYISLLRLILFVEAVASAIIFWSD-----GWL 56
           E +EN+   Y        +Q +KA  +   +S LR+ +F+     A  F+S      G  
Sbjct: 3   ESRENL---YLGRASRFAEQEKKAAAKSGAVSWLRVAVFIAGAGLAYYFFSTDSNTAGAA 59

Query: 57  KLIVFTVIPIIAFIWLVQSHNRWFYWKDYLKKKIEINQQELRALQYDFSDFDNGKEYIDP 116
            ++ F ++ I+   W    H+R  +    L+    +N+QE+  LQ     FD+G+E++D 
Sbjct: 60  AILFFYLVFILVMRW----HSRLDFTYQQLRLLRLVNEQEVERLQGKLGRFDSGQEFVDD 115

Query: 117 SHLYTFDLDIFGEHSLFQYINRTSTPIGKQRLANWFNAHLEEKEAIEQRQEAIRELSSE- 175
            H Y+ DLDIFG++SLFQ +NR+ T +GK++LA+W       +E + QRQ+A  ELS++ 
Sbjct: 116 HHPYSSDLDIFGQNSLFQLLNRSVTSVGKEKLASWLRQAAAPQEVL-QRQQAAAELSADD 174

Query: 176 -LEFRQQFRLLGLLYKGKPSDTSEIKEWVNSPSDYRKHAFLRILPTAVGIINLLCIGATI 234
            L++ Q+   L + YK   +  +    W +  + +R+HA+LR L   + ++ L  I A +
Sbjct: 175 RLDWLQEALALPMHYKHDEASAATFINWFSGKAFFRQHAWLRPLILILPVLTLAAIAAWL 234

Query: 235 LGFLPASISGIVFACFVVFSFIFSKGITKIQATYGEK----LQILSTYADQILITEKKEM 290
            G     +SG +   F++  F+ +      +  Y E      + + +Y  Q+   EK+  
Sbjct: 235 YG-----MSGWIPVAFLLVQFLLAYRFRVERDEYYENSIGIYEAIRSYTKQLQHIEKQSF 289

Query: 291 HSPALQQLKAELTSQNQTASQSVHRLAKLMNALDQRGNLLMSTILNGLLFWELRQVMQIE 350
            +P LQ L+ +L++    AS S+++LA +++    R + LM+  LN +L W+   + ++E
Sbjct: 290 TAPKLQALQQQLSASGTKASVSINKLASIIDFFSWRLSTLMAFFLNTVLMWDFVWMYRLE 349

Query: 351 KWKEAHSADLPRWIEAIGAIDAYCSLATFSYNHPDYIYPQITSQSFHLQAEALGHPLMNR 410
            WK  H   L   ++ +   +A  S+A F + HP Y  PQ++   F  QA AL HPL+  
Sbjct: 350 SWKGQHLQQLEHSLDVLSEFEALTSIAAFQHAHPQYAVPQLSQVPFFYQATALAHPLIFS 409

Query: 411 NKCVRNGIDMEKRPFFIIITGANMAGKSTYLRTVGVNYLLACIGAPVWAAKMEIFPARLV 470
            + V N  +M+     I+ITG+NM+GK+T+LRTVG+N +LA +GAP  A  + + PA++ 
Sbjct: 410 VRPVSNDFEMQGAGHTIVITGSNMSGKTTFLRTVGINMVLALMGAPACARSITVAPAQVY 469

Query: 471 TSLRTSDSLTDNESYFFAELKRLKLIIDKLKAGEELFIILDEILKGTNSMDKQKGSFALI 530
           T++RT+D+L +N S F+AELKRL+++++  + G+ +F +LDEILKGTNS D+  G+ +LI
Sbjct: 470 TAMRTADNLAENTSSFYAELKRLRVLLELTEQGQPVFYLLDEILKGTNSRDRHLGAMSLI 529

Query: 531 KQFMSMDANGIIATHDLLLGTLIDAFPQNIRNYCFEADITNNELTFSYQMRSGVAQNMNA 590
           +Q    +A G+I+THDL LG +    P +++N+ F +DI  NE+ F Y++  G+ ++ NA
Sbjct: 530 RQLHKRNAAGLISTHDLELGAMEQELPGSVKNFSFNSDIIGNEINFDYKLTPGLCRSFNA 589

Query: 591 CFLMKKMGIAV 601
             LM+ MGI +
Sbjct: 590 SKLMQLMGIEI 600