Pairwise Alignments

Query, 604 a.a., DNA mismatch repair protein mutS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 877 a.a., DNA mismatch repair protein MutS from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 69.7 bits (169), Expect = 5e-16
 Identities = 80/347 (23%), Positives = 162/347 (46%), Gaps = 42/347 (12%)

Query: 256 IFSKGITKIQATY----GEKLQILSTYADQILITEKKEMHSPALQQLKAELTSQNQTASQ 311
           I + GI+ ++  Y    G  L++   + D++  T  ++     L   +  +T + +T  +
Sbjct: 457 IKNTGISSLKIAYNKVFGYYLEVTHAHKDKVPSTWIRKQ---TLVNAERYITEELKTYEE 513

Query: 312 SVHRLAKLMNALDQRGNLLMSTILNGLLFWELRQVMQIEKWKEAHSADLPRWIEAIGAID 371
                 K++NA ++R   +   + N L+ + +  V Q+++  +            IG ID
Sbjct: 514 ------KILNA-EERIYTIEFGLFNELVLYAMDYVAQVQQNAKV-----------IGVID 555

Query: 372 AYCSLATFSYNHPDYIYPQITSQSFHLQAEALGHPLMNRN-----KCVRNGIDME-KRPF 425
              + A  + +   Y+ P++ + +  L      HP++ +        V N I ++ ++  
Sbjct: 556 CLSAFAGIALSS-SYVKPEV-NDTHVLDIRKGRHPVIEKQLPLGEAYVPNDIFLDDEQQQ 613

Query: 426 FIIITGANMAGKSTYLRTVGVNYLLACIGA--PVWAAKMEIFPARLVTSLRTSDSLTDNE 483
            IIITG NMAGKS  LR   +  L+A IG+  P  AA + +   ++ T +  SD+L+  E
Sbjct: 614 VIIITGPNMAGKSALLRQTALVVLMAQIGSFVPAEAATIGVID-KIFTRVGASDNLSKGE 672

Query: 484 SYFFAELKRLKLIIDKLKAGEELFIILDEILKGTNSMDKQKGSFALIKQFMS---MDANG 540
           S F  E+     I++ L   +   +++DEI +GT++ D    ++A+++   +     A  
Sbjct: 673 STFMVEMTETASILNNL--SDRSLVLMDEIGRGTSTYDGISIAWAIVEHLHNHPKYKAKT 730

Query: 541 IIATHDLLLGTLIDAFPQNIRNYCFEADITNNELTFSYQMRSGVAQN 587
           + ATH   L  L +  P+ ++NY         ++ F  ++  G +++
Sbjct: 731 LFATHYHELNQLAEELPR-VKNYNVSVREAGGKILFMRKLVPGGSEH 776