Pairwise Alignments

Query, 604 a.a., DNA mismatch repair protein mutS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 556 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  100 bits (248), Expect = 2e-25
 Identities = 114/491 (23%), Positives = 215/491 (43%), Gaps = 43/491 (8%)

Query: 117 SHLYTFDLDIFGEHSLFQYINRTSTPIGKQRLANWFNAHLEEKEAIEQRQEAIRELSSEL 176
           SH  + DL +     +F+YI+RT++ IG+Q L     A   + E +++    ++      
Sbjct: 75  SHQISEDLYL---DEVFKYIDRTTSRIGQQYLYYKLRAVDSDIEKLKRFDRLVKAFLQHD 131

Query: 177 EFRQQFRLLGLLYKGKPSDTSEIKEWVNSPSDYRKHAFLRILPTAVGIINLLCIGATILG 236
             R Q +LL  L   +  D+   +E +        H      P  + ++ +L      L 
Sbjct: 132 AQRTQCQLL--LKPLEKGDSYYFEEML--------HGEPVQAPKWLPLVYVLSFAVLALA 181

Query: 237 FLPASISGIVFACFVVFSFIFSKGITKIQATYGEKLQILSTYADQILITEKKEMHSPALQ 296
            L  +  G++     +F       I  +   Y  K  I + Y   I ++E  + ++ A +
Sbjct: 182 VLAFAFPGLLLFLLPLF-------IVNLLVHYWNKENI-NYYL--IALSEFDKAYTAAGK 231

Query: 297 QLKAELTSQNQTAS---QSVHRLAKLMNALDQRGNLLM-STILNGLLFWELRQVMQIE-- 350
             +  +  ++  +S   Q++  L K M  ++        ST +   LF  L+    +E  
Sbjct: 232 LQEQTIVKEHGASSDFLQALTPLKKKMRWVNFSSQFESDSTSIFYALFELLKIAFNLEIL 291

Query: 351 ------KWKEAHSADLPRWIEAIGAIDAYCSLATFSYNHPDYIYPQITSQSFHLQAEALG 404
                 +  +A +A L      IG +DA  S A+     P    P        L    L 
Sbjct: 292 FFFSLTRSIKAKAAPLNELFVFIGQLDAAISTASLRAGLPVCCTPTFCPPK-QLNVSGLR 350

Query: 405 HPLMNRNKCVRNGIDMEKRPFFIIITGANMAGKSTYLRTVGVNYLLACIGAPVWAAKMEI 464
           HPL+    C+ N + + ++   +++TG+NM+GK+T++R VG+N LLA       A + E 
Sbjct: 351 HPLLK--DCIPNDLRLSRKS--LLLTGSNMSGKTTFIRAVGLNMLLAQTLYCCTAERFEA 406

Query: 465 FPARLVTSLRTSDSLTDNESYFFAELKRLKLIIDKLKAGEELFIILDEILKGTNSMDKQK 524
             +++ TS+  +D L   +SY+F E+  +K  ++  +  E    ILDEI KGTN++++  
Sbjct: 407 PFSKIHTSINITDDLLSEKSYYFEEVTTIKAFLECSQQTEPALFILDEIFKGTNTVERIA 466

Query: 525 GSFALIKQFMSMDANGIIATHDLLLGTLIDAFPQNIRNYCFEADITNNELTFSYQMRSGV 584
           G  A++      +   +++THD  L  L+    +    + F   +    L F ++++ G 
Sbjct: 467 GGKAILSYLAKGNHLVLVSTHDTELTALL---TEEFALHHFSESVQGTALLFDHKIKPGP 523

Query: 585 AQNMNACFLMK 595
               NA  +++
Sbjct: 524 LTTRNAIKILE 534