Pairwise Alignments

Query, 434 a.a., putative cell surface protein, have conserved domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 655 a.a., NHL repeat./Predicted periplasmic protein (DUF2233). from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)

Query: 324 TGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVT 383
           +G+   FAG  G +G+ DG+A  A+FNSP ++++D +GN+ +AD GNH IR I  NG V+
Sbjct: 386 SGDVSTFAGT-GIAGFTDGVAGVAKFNSPWKVAVDNQGNVIVADRGNHSIRKITPNGTVS 444

Query: 384 TPIGQPGEAGYADGSPDMALLNDPRGVAVNSEGDVYIADLGNRCIRKL 431
           T  G     GY DGS + A  + P  VAV   G++ IAD  N CIR +
Sbjct: 445 TLAGTTN--GYQDGSGNQAKFDQPTDVAVLPNGNIVIADNRNHCIRMI 490



 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 44/107 (41%), Positives = 70/107 (65%), Gaps = 2/107 (1%)

Query: 326 EHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTP 385
           E +  AG  G +G+ +G ++ A+F++P  +++D +GNI++AD  N+ IR I  +G V+T 
Sbjct: 334 ETETIAGT-GIAGFQNGSSSTAKFDNPEGIAIDQQGNIFVADRDNNVIRKISSSGDVSTF 392

Query: 386 IGQPGEAGYADGSPDMALLNDPRGVAVNSEGDVYIADLGNRCIRKLT 432
            G  G AG+ DG   +A  N P  VAV+++G+V +AD GN  IRK+T
Sbjct: 393 AG-TGIAGFTDGVAGVAKFNSPWKVAVDNQGNVIVADRGNHSIRKIT 438



 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 337 SGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGYAD 396
           +G+ DG    A+F+ P  +++   GNI IAD+ NHCIRMID +  V+T I   G  GY D
Sbjct: 451 NGYQDGSGNQAKFDQPTDVAVLPNGNIVIADNRNHCIRMIDSSVQVST-IAGTGNGGYVD 509

Query: 397 GSPDMALLNDPRGVAVNSEGDVYIADLGNRCIRKL 431
           G+   A    P G+  +  G++++AD  N  IRK+
Sbjct: 510 GAGSQAQFYYPSGIDTDPNGNLFVADRKNHAIRKI 544



 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 335 GQSGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGY 394
           G  G+ DG  + A+F  P  +  D  GN+++AD  NH IR ID    V+T  G  GE G 
Sbjct: 503 GNGGYVDGAGSQAQFYYPSGIDTDPNGNLFVADRKNHAIRKIDSYHNVSTVAGGNGE-GI 561

Query: 395 ADGSPDMALLNDPRGVAVNSEGDVYIADLGNRCIRKL 431
            +G   +A  +DP GVAV   G V +ADL N  IR++
Sbjct: 562 QNGGIAVAKFDDPYGVAVGQNGKVLVADLDNNVIREI 598



 Score = 65.9 bits (159), Expect = 4e-15
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 46/367 (12%)

Query: 89  LLVPKLPGNDCIVTVKVGNQEARFTRNFQYIEN--YSVTTIAGQPGTNLFVEGTLAAAQF 146
           LLV  LPGN         N   R   N   +    Y   TIAG  G   F  G+ + A+F
Sbjct: 306 LLVRNLPGNP--------NNSHRELVNSWLVYRCLYETETIAGT-GIAGFQNGSSSTAKF 356

Query: 147 GPVQHLAIDDENNLFITERNGSDGKGTCSVLNEESGTVTFLFKASDNL------NVP-TV 199
              + +AID + N+F+ +R+ +  +   S  +  +   T +   +D +      N P  V
Sbjct: 357 DNPEGIAIDQQGNIFVADRDNNVIRKISSSGDVSTFAGTGIAGFTDGVAGVAKFNSPWKV 416

Query: 200 NAQTQ-NVYIPLDGGYTFYELNPVNQWIAKSRLVLHPSKEQQEAGMDDFEINWKHSLAFS 258
               Q NV +   G ++  ++ P N  ++    +   +   Q+   +  + +    +A  
Sbjct: 417 AVDNQGNVIVADRGNHSIRKITP-NGTVST---LAGTTNGYQDGSGNQAKFDQPTDVAVL 472

Query: 259 RYDNMIYTRSYGGDLIKVDPETRV----GQKIGNFFPNTDS-----FIVAHPTQPE-ILY 308
              N++   +    +  +D   +V    G   G +     S     +     T P   L+
Sbjct: 473 PNGNIVIADNRNHCIRMIDSSVQVSTIAGTGNGGYVDGAGSQAQFYYPSGIDTDPNGNLF 532

Query: 309 IAYAAKHVIYT----YNIETGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDMEGNIY 364
           +A    H I      +N+ T      AG  G+   N GIA  A+F+ P  +++   G + 
Sbjct: 533 VADRKNHAIRKIDSYHNVST-----VAGGNGEGIQNGGIAV-AKFDDPYGVAVGQNGKVL 586

Query: 365 IADSGNHCIRMIDKNGIVTTPIGQPGEAGYADGSPDMALLNDPRGVAVNSEGDVYIADLG 424
           +AD  N+ IR I+    V+T IG  GE GY DG    + +N P  V VN + ++  AD G
Sbjct: 587 VADLDNNVIREIN-GDYVSTIIGSNGE-GYIDGPSTASKMNSPTDVLVNGD-EIIFADYG 643

Query: 425 NRCIRKL 431
           N  +RK+
Sbjct: 644 NHLVRKV 650