Pairwise Alignments

Query, 434 a.a., putative cell surface protein, have conserved domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 492 a.a., NHL repeat./IPT/TIG domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 125/479 (26%), Positives = 196/479 (40%), Gaps = 74/479 (15%)

Query: 10  VVIIVIVTIVFSC---SKNEAGNSEYDPSLPISLTDFFPIQGGMATRMVIEGANFGTDLS 66
           +++++I  I   C   ++ E   + +DP+ P+ ++ F P  GG   R+VI G NFGTD  
Sbjct: 17  LLMVLIGGIFGGCQMDNQEEESFAPFDPNKPVVVSGFTPSSGGAGQRLVIYGENFGTDPE 76

Query: 67  QIKVFFNQKEASILNVKNSIIYLLVPK--LPGNDCIVTVKVGNQEARFTRN----FQYIE 120
            + VF   KEA+++NVK   +Y LVPK    G+   V V+VG        +    F Y  
Sbjct: 77  MVSVFIGGKEATVINVKGESLYCLVPKQAFAGD---VEVRVGEAGREVISDADVYFDYQR 133

Query: 121 NYSVTTIAG---QPGTNLFVEGTL-------AAAQFGPVQHLAIDDEN--NLFITERNGS 168
              V+T+ G     G   + +G          A+ F     +  D  N  +L++T     
Sbjct: 134 KMVVSTLIGYKNDRGDEPWKDGKFKADDESEMASGFWEPSFMKFDPLNPKHLWVT----F 189

Query: 169 DGKGTCSVLNEESGTVTFLFKASDNLNVPTVNAQTQNVYIPL------DGGYTFYELNPV 222
           D      +++ E  TVT   K SD     +++      Y+ +      +     Y L+  
Sbjct: 190 DFNNGLYLIDLEDSTVT--KKRSDFDRPRSIDFTNDGQYMIIAEDRGGENDRATYRLSRD 247

Query: 223 NQWIAKSRLVLHPSKEQQEAGMDDFEINWKHSLAFSRYDNMIYTRSYGGDLIKVDPETRV 282
             W  + R +L  ++ +Q  G     +N +  L F+ Y+   + R    DL K   E   
Sbjct: 248 KDW--QDREIL--TRYRQCNGASVHPVNGE--LYFNSYEKGQFFRF---DLNKYFSEGLG 298

Query: 283 GQKIGNFF----PNTDSFIVAHPTQPEILYIAYAAKHVI--YTYNIETGEHK---LFAGA 333
            +     F    P  +  +  HP+     YI    +H I    YN E  +     L  G 
Sbjct: 299 DKDYETLFVVHDPEWEYKVFIHPS-GNYAYILVINQHYILRVDYNWEKEQFNQPYLVCGQ 357

Query: 334 FGQSGWNDGIATDAEFNSPRQ-----------MSLDMEGNIYIADSGNHCIRMIDKNGIV 382
               G+ DG+ ++    +P Q                E + Y  D  NH IR +   G V
Sbjct: 358 LRSPGYQDGVGSEVRMRNPYQGVFVKNEDYAAEGKPDEYDFYFTDQYNHAIRKLSPEGSV 417

Query: 383 TTPIGQ------PGEAGYADGS-PDMALLNDPRGVAVNSEGDVYIADLGNRCIRKLTLQ 434
           TT  G+      P   GY DG   + A  + P G+A  S+G  YI D  N  IRK+ L+
Sbjct: 418 TTFAGRGSSSINPDPYGYVDGDLREEARFDRPSGIAY-SDGAFYIGDQMNHRIRKIALE 475



 Score = 28.9 bits (63), Expect = 4e-04
 Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 287 GNFFPNTDSFIVAHPTQPEILYIAYAAKHVIYTYNIETGEHKLFAGAFGQS------GWN 340
           G F  N D      P + +  Y      H I   + E G    FAG    S      G+ 
Sbjct: 379 GVFVKNEDYAAEGKPDEYDF-YFTDQYNHAIRKLSPE-GSVTTFAGRGSSSINPDPYGYV 436

Query: 341 DG-IATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTPIGQPGE 391
           DG +  +A F+ P  ++   +G  YI D  NH IR I    + T    +P E
Sbjct: 437 DGDLREEARFDRPSGIAYS-DGAFYIGDQMNHRIRKIALEELDTEDTEEPEE 487