Pairwise Alignments

Query, 384 a.a., putative mobilization protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 398 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  164 bits (414), Expect = 5e-45
 Identities = 107/377 (28%), Positives = 190/377 (50%), Gaps = 25/377 (6%)

Query: 12  DMRLALLSFENYLLANRNTEKPVLHIALSPAPEDKLTDEQLAELAQNYMQKMGYGDQPYI 71
           D +  L  F+  +  N   +   LHI+L+ +P DK+ +  L ++ ++YM+ +G+G+QPY+
Sbjct: 43  DFQKKLARFQKIIETNTRAKTNALHISLNFSPRDKVDEPLLWKITEDYMRGIGFGEQPYL 102

Query: 72  AYKHGDTHNTHIHIVSVCVDEEGRKI-NDSFEHRRSMTACRELEIDFGLRNGADMEER-- 128
            Y+H D  + HIH+V+  + E+G++I   +    +S    +++E  +GL    + + +  
Sbjct: 103 VYRHFDAAHPHIHVVTTNIREDGQRIETHNLGRVQSEKTRKDIEQRYGLVKAEEQQRKHV 162

Query: 129 NQKAEMKKVDATQGDVRHQIGNTLKAVLESYRFQTFGEYSALLSTLNIEAKQVRGEFKGE 188
           N    + K +  + + +  I N +  V+  Y+F +  E +A+L   N+ A +   + K  
Sbjct: 163 NLLQSLDKAEYGKTETKAAISNIVGEVVRHYKFTSLAELNAILRQFNVTAYRGEEDSKMY 222

Query: 189 PYTGIIYSATDDSGKVVSPPFKSSRFGKRFGNERLEKRMLSHTRDFKDGKWAPTIHAQVV 248
              G+IYS +D +G     P K+S    +   ++LE +   +    K+  +   + + V 
Sbjct: 223 QKKGLIYSISDANGNRRGVPIKASSIYSKPTYKKLEMKFELNRTARKN--YRNQLRSTVN 280

Query: 249 YAMRHARSREELAGLLKKARIDAVFRENEQGRIYGVTFIDHNRREVFNGSRMGKEFSANI 308
            A+  + S E+L   L+K  +    R+NE+G++YG+TF DH  R VFNGS +GKEFSAN 
Sbjct: 281 DALTRSSSLEDLQVKLRKKGVHLTVRKNEEGKVYGITFTDHIHRCVFNGSSLGKEFSAN- 339

Query: 309 YNELFKWWDGIPATERSAHTGTELWQHHSHKAESGSPLEQAASIFSMETNPVDYGEEALA 368
                    GI       HT     +  +HK ++G         FS  TNP   G E   
Sbjct: 340 ---------GIQKAMMVKHTD----EPQTHKQQTGE-----NQSFSFPTNPQTSGYEPTP 381

Query: 369 RRM-KKRRKAKRKSRGI 384
             + +K+RK KR+ + +
Sbjct: 382 YELSQKKRKKKRRKKNL 398