Pairwise Alignments

Query, 432 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 417 a.a., Bacteroides conjugative transposon TraM protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 5/168 (2%)

Query: 260 RNVGFNTPVGKVLTSDRNTIPACVHGTQTVSDGQALRIRLLEPMVADDRFIPKGTILTGG 319
           R  G +      + + +  IPA VH  Q +  G +L++ L E +  +   IPKG ++ G 
Sbjct: 247 RFYGLDETATATVETVKPAIPAMVHEDQELVSGASLKMELTERVFINGMAIPKGALVFGT 306

Query: 320 ARMEGERLDILVQAVEYKGTVIPVELEVYDADGQRGIPVPNSMEYDAAREIAANMGTSMN 379
            ++ GERL + ++A+    T++PV+LEVYD D   GI VP ++   +A+E A   G ++ 
Sbjct: 307 CQLNGERLKVKIEAIRKGQTILPVKLEVYDLDALPGIRVPGAIARKSAKEGA---GDALQ 363

Query: 380 GSINISTDAGAQIASDLGKGVIQGVSGYVAKKMRTVKVTLKAGHRLLL 427
           G   +  D   Q  S      ++ V G  +KK + +KV +KAGH LLL
Sbjct: 364 GMQTMGYDPSWQ--SQAATAGMETVKGLFSKKAKLIKVKVKAGHPLLL 409