Pairwise Alignments

Query, 445 a.a., putative outer membrane efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 448 a.a., transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 104/463 (22%), Positives = 195/463 (42%), Gaps = 39/463 (8%)

Query: 2   KVINKMMAIILLSGTGIGSVQAQDTTPQTWTLRQCIDYAIEHNIDIRQTANEAEQNKISV 61
           K I+ ++A++ L    +G   AQ+  P    L++ I YA++H   ++ T NE    K  V
Sbjct: 3   KQISLLIAVLAL----LGKSYAQE--PMPLGLQESIKYALQHRASLQATRNEERIAKARV 56

Query: 62  NTAKWARLPNLNGGISQGWSWGRTASPKDNSYSDTNSSSTGVNLSTNVPLFTG------- 114
              +   LP +NG +  G ++ +  S      +D N+        T  P +T        
Sbjct: 57  GEIRATGLPQINGTVDAGNNFVQQQSFIPAIIADENADPNAFIPVTFTPAYTSNATVTGS 116

Query: 115 -LQLSNQYSL----AKLNLQAAIEDLNKAKEDIAINVTSAYLQVLFNLE-LNKVAQNQVE 168
            L     Y +    AK     + ++  +++ ++A  V+ AY  VL N E +  + QN V 
Sbjct: 117 QLLFDGSYLIGLKAAKTYTDLSRKNTAQSEIEVAEQVSKAYYGVLVNGERMELLNQNLVR 176

Query: 169 LSKDQLKRIKGLHDVGKASPAEVAEAQARVAQDEMTAVQADNTYKLSLLSLSQLLELPTP 228
           L    LK+ + + + G A   +V   + ++   ++   +     +LS   L   + LP  
Sbjct: 177 LDT-LLKQTQVMFENGVAEKLDVDRLRVQLNNLKVELQKTQRLMELSENLLKFQMGLPQA 235

Query: 229 EGFVLENPKEELKFEPLTAPDDIYIQAIAYKPGIKAAEYRLQGSLK--NIRIAQSEFYPQ 286
           +  +L +   E+  +       +Y Q+  Y   I+ +    Q  L   ++R  +S + P+
Sbjct: 236 QPVLLTDELAEVDIDM----GRLYPQSFEYSNRIEYSILETQRDLAELDLRNRKSGYLPK 291

Query: 287 LSFSAGLGSSYYTLNGEAESGFARQLKNNLSKSISFN-----LSVPIFNRFSTRNRVRTA 341
           L  +A  G   Y   G A S  +     NLS  + F      L VPIF+      +++  
Sbjct: 292 LLLNARYG---YLAAGNAFSNIS-----NLSNYLEFGYVGAQLQVPIFDGLRKHYQIQQT 343

Query: 342 RLQQSNLALQLDNAKKVLYKEIQQAWYNAVAAESKYTSSEVAVKANEESFRLMSEKFNNG 401
           ++   N  L  +  ++ +  E++QA      A     + + +++   E  R+   KF  G
Sbjct: 344 KIALDNTKLGFETLRQSIDLELEQASTELTNALDVLEAQQESLELANEIARVAKIKFQEG 403

Query: 402 KATFVEYNEAKLNLTKALSDKLQAKYDYLFRTKILDFYKGEII 444
             T +E   A+ +L +A ++   A YD L     L+   G ++
Sbjct: 404 VGTNLEVVSAETDLREAQTNYYAAIYDALIAKVNLEKATGTLL 446