Pairwise Alignments

Query, 445 a.a., putative outer membrane efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 488 a.a., transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  243 bits (621), Expect = 8e-69
 Identities = 147/486 (30%), Positives = 247/486 (50%), Gaps = 42/486 (8%)

Query: 1   MKVINKMMAIIL---LSGTGIGSVQAQDTTPQTWTLRQCIDYAIEHNIDIRQTANEAEQN 57
           MK  +K + + L   L+G    + Q        WTL++ ++YA  HN+ +RQ   + +  
Sbjct: 1   MKKTSKSLLLALGLSLAGASAATAQQDPGADGVWTLQEAVEYAKLHNLQVRQALIDKQGA 60

Query: 58  KISVNTAKWARLPNLNGGISQGWSWGRTASPKDNSYSDTNSSSTGVNLSTNVPLFTGLQL 117
            +++  +K+ RLP+LNGG S  +++G +  P  N + +    S   + +  VPLF GLQL
Sbjct: 61  DVNLRQSKFTRLPSLNGGASHSYNYGTSIDPLTNEFQNQQIRSNNFSATAAVPLFQGLQL 120

Query: 118 SNQYSLAKLNLQAAIEDLNKAKEDIAINVTSAYLQVLFNLELNKVAQNQVELSKDQLKRI 177
             Q    ++ ++A   D+   + DI + + ++YL +LF  E+ K A+ Q   ++ QL R 
Sbjct: 121 QKQVKQNEILVEATANDVLSTQNDITLQILTSYLNILFANEVVKTAELQQASTQQQLDRT 180

Query: 178 KGLHDVGKASPAEVAEAQARVAQDEMTAVQADNTYKLSLLSLSQLLELPTPEGFVLENPK 237
           + L + G  +   V E ++++A DE+  + A N  ++S L+L QLL+L  PE F +  P+
Sbjct: 181 RILFEAGSVAETNVLELESQLASDELNLINAQNQIEISRLNLIQLLDLDNPESFEIVVPE 240

Query: 238 EELKFEPLT--APDDIYIQAIAYKPGIKAAEYRLQGSLKNIRIAQSEFYPQLSFSAGLGS 295
                  +T  +PD +Y  A+   P IKAA+ R+Q +   + IA+  +YP+LS +  L +
Sbjct: 241 VPAPDTNITIVSPDQVYDVAVQTLPEIKAADLRIQSAETGVGIARGAYYPRLSLNGSLFT 300

Query: 296 SYYT---------LNGE----------------------------AESGFARQLKNNLSK 318
            Y +         + GE                             E+ F  Q+  N  K
Sbjct: 301 GYSSSRSLFSNDAVEGEYIRQDIGFQNPDGTVPVSVYVPRTVTTVTETPFWDQIDENYGK 360

Query: 319 SISFNLSVPIFNRFSTRNRVRTARLQQSNLALQLDNAKKVLYKEIQQAWYNAVAAESKYT 378
           SI+F+LS+P+FN    R+ V  A+L +    L  +  +  L + I+QA  +A AA   Y 
Sbjct: 361 SIAFSLSIPVFNGLQARSAVERAKLTRETAQLNAELQRNQLRQNIEQAAADAQAALRSYV 420

Query: 379 SSEVAVKANEESFRLMSEKFNNGKATFVEYNEAKLNLTKALSDKLQAKYDYLFRTKILDF 438
           +S   V++ E S+R    + N G     ++N    +  +A SD LQAKYDY+F+ K+LDF
Sbjct: 421 ASRRQVESLERSYRNAELRLNAGIINSTDFNVISNDYRRAQSDLLQAKYDYIFKLKVLDF 480

Query: 439 YKGEII 444
           Y+G+ I
Sbjct: 481 YQGKDI 486