Pairwise Alignments

Query, 445 a.a., putative outer membrane efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 457 a.a., membrane protein from Magnetospirillum magneticum AMB-1

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 91/416 (21%), Positives = 180/416 (43%), Gaps = 28/416 (6%)

Query: 21  VQAQDTTPQTWTLRQCI--DYAIEHNIDIRQTANEAEQNKISVNTAKWARLPNLNGGISQ 78
           V A  T   + TL + +   Y+    +  R+    +    +    + W    +L G + +
Sbjct: 15  VVAASTPAMSETLEEVLASTYSSNPTLLARRAKLRSTDEGVPQALSNWRPTVSLTGSVGR 74

Query: 79  GWSWGRTASPKDNSYSDTNSSSTGVNLSTNVPLFTGLQLSNQYSLAKLNLQAAIEDLNKA 138
           G     T SP    YS + +  T   L+ + PLF G +     + A+ N+ +    L   
Sbjct: 75  GSYDNNTLSP----YSMSRTPRTQA-LTLSQPLFRGGRTLAATAQAENNVLSERAQLAAT 129

Query: 139 KEDIAINVTSAYLQVLFNLELNKVAQNQVELSKDQLKRIKGLHDVGKASPAEVAEAQARV 198
           ++ I +   +AYL V+ +  + K++ N  ++ + Q +  +    VG+ +  +V++A+AR+
Sbjct: 130 EQTILLAAATAYLNVVRDDAVLKLSINNEQVLRRQYEATEERFKVGELTRTDVSQAEARL 189

Query: 199 AQDEMTAVQADNTYKLSLLSLSQLLELPTPEGFVLENPKEELKFEPLTAPDDIYIQAIAY 258
           A+     V A+   + S  +    +  P PE  V       L      + DD+   A+A 
Sbjct: 190 AKATADRVAAEGNLQSSRANYVNNVGRP-PEALVTPAQPPALP----QSLDDVTSTALAA 244

Query: 259 KPGIKAAEYRLQGSLKNIRIAQSEFYPQLSFSAGLGSSYYTLNGEAESGFARQLKNNLSK 318
            P + +A++    +   + +   E  P +S SA +  ++ T   E  S          ++
Sbjct: 245 NPTVVSADFTHAAAKDGVDLVFGELLPTVSLSADISRNFETSTRENSS---------TAR 295

Query: 319 SISFNLSVPIFNRFSTRNRVRTARLQQSNLALQLDNAKKVLYKEIQQAWYNAVAAESKYT 378
            +  N+SVP++   S  +RVR ++       ++ D A++   +   ++W    AA ++  
Sbjct: 296 EVLLNVSVPLYESGSVYSRVRASKHTAGQRRIEADQARRDAVETGTKSWETLQAARAQAR 355

Query: 379 SSEVAVKANEESFRLMSEKFNNGKATFV-------EYNEAKLNLTKALSDKLQAKY 427
           S +  +KA+E +   + E+   G  T +       E  +A++NL KA  D L   Y
Sbjct: 356 SYQAQIKASELALAGVREESKVGSRTILDVLNAEQELFDARVNLVKAQRDVLAGAY 411