Pairwise Alignments

Query, 445 a.a., putative outer membrane efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 511 a.a., TolC family outer membrane protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 91.3 bits (225), Expect = 7e-23
 Identities = 82/352 (23%), Positives = 164/352 (46%), Gaps = 26/352 (7%)

Query: 92  SYSDTNSSSTGVNLSTNVPLFTGLQLSNQYSLAKLNLQAAIEDLNKAKEDIAINVTSAYL 151
           S S+T  ++ GV++S NV  +T  + S     A+ ++ A  E+L + ++ + ++V  AY+
Sbjct: 103 SSSETEGANVGVSVSQNV--WTAGRTSRAIDQARASVLAGRENLREIEQSVMLSVIQAYV 160

Query: 152 QVLFNLELNKVAQNQVELSKDQLKRIKGLHDVGKASPAEVAEAQARVAQDEMTAVQADNT 211
            V  ++E+ ++ Q  + + + QL+      +VG+ +  +VA+A+A  AQ E     A   
Sbjct: 161 NVTRDMEILRIRQENLTVLQRQLEETSARFEVGEITRTDVAQAEASQAQSEADLANAQ-- 218

Query: 212 YKLSLLSLSQLLELPTPEGFVLENPKEELKFEPL--TAPDDIYI---QAIAYKPGIKAAE 266
                   +QL         V+     +L+  P+    P D  +    A+   P + AA 
Sbjct: 219 --------AQLSTSRAAYAAVVGQSPADLEAAPVLPEVPSDFDVAIETALQRNPAVLAAT 270

Query: 267 YRLQGSLKNIRIAQSEFYPQLSFSAGLGSSYYTLNGEAESGFARQLKNNLSKSISFNLSV 326
           Y+LQ +   +  A+SE+ P +  +A  G S   L      G   +L +  S +    LSV
Sbjct: 271 YQLQSAEAAVAAARSEYLPSVRATASYGGSTNDL------GDLGELADRRSFTAGATLSV 324

Query: 327 PIFNRFSTRNRVRTARLQQSNLA-LQLDNAKKVLYKEIQQAWYNAVAAESKYTSSEVAVK 385
           P+F     R+RV  A L+++N A + ++  ++ + + +  A+   ++  +   +   AV+
Sbjct: 325 PLFTGGLNRSRVAQA-LERANAAQIGIEGERRTVLQNVSSAYAQVLSTRATVAAGTEAVR 383

Query: 386 ANEESFRLMSEKFNNGKATFVEYNEAKLNLTKALSDKLQAK-YDYLFRTKIL 436
           A   +   + ++   G  T ++    +L L  A +    A+  +Y+ R  +L
Sbjct: 384 AASVAAEGVRQEAQVGLRTTLDVLNQELALRNAQTSVASARAAEYVARASLL 435