Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 557 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (320), Expect = 9e-34
 Identities = 139/492 (28%), Positives = 205/492 (41%), Gaps = 103/492 (20%)

Query: 66  DDYTSRDLLTSFDDGTLNGQNAWVTSL--------------WGNQYKAISRANAVIEKSH 111
           D +    L ++ DD   +GQ+  V  L              WGN Y  I +AN  +E S 
Sbjct: 59  DRFGGGTLASATDDALHSGQDGQVQQLAHGNWGAFSNPDDQWGNLYDGIRKANLFLENSV 118

Query: 112 RAIENGASATTINR---------------LIAEAKFHRAAAYAKLIVKFGDLPLVLTDVS 156
              EN     TI                 L AEA F +A  Y +L  ++G++P++   + 
Sbjct: 119 D-FENTILRDTITEQGKQTYQTQVNDLGWLRAEAHFLKAFFYFELTKRYGEVPIIEEVLD 177

Query: 157 TEEGLTMGRTDKSIVLAQIYKDFDDAISVLPTSYTDQQ------RATQGAALALKARVAL 210
            E+ +   R      +  +  + + A+  +  ++          RAT GAA+ALK R+ L
Sbjct: 178 LEDVVGYERRPYGECVDHMLSELELAMEGMRDTWEGYDENRMLGRATTGAAMALKTRILL 237

Query: 211 IMED-----------WETAADAAKAVMDLNIYELHPDFGNLFLSTTKNSNEFIFKIPRDA 259
                          W++AA AA  V++   Y L  ++GNLF S+  ++ E I      A
Sbjct: 238 YAASPLHNPENDPSKWQSAARAAYEVINSGRYGLFDNYGNLFRSS--DNTEIILSRRYAA 295

Query: 260 TYDIYLGTGNGGVNQVYNDLPRNV------GGWTQTCPSWELLAAFTCTDGLLINESPLF 313
           +                N L R++      G    T PS  L+ A+   +GL I E   +
Sbjct: 296 S----------------NSLERSMYPVGFTGALGGTNPSQNLVDAYQTINGLSITEDERY 339

Query: 314 DPHEPFANRDPRLAETIVPFGSNHLGYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYAS 373
           DP  P+ NRDPRL  +I+  G+++ G         L              D    A+ A+
Sbjct: 340 DPQHPYQNRDPRLKMSILTHGASYKGRPLEIWRGGL--------------DGPGRAR-AT 384

Query: 374 FDGLVWKKGIDETW--LQNGFKVDQDIIYCRYAEILLTYAEAKIELNEIDN-------SV 424
             G   KK +DE    LQN   V    IY RY EILL YAEA  E++  D        S 
Sbjct: 385 KTGYYQKKYVDENLDLLQNRTSVHA-WIYFRYGEILLNYAEAMNEVHGPDGTSEMMPWSA 443

Query: 425 LDALNEVRARAYGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKL 484
            +ALN +RAR  GV        P  T++ +   R  +R ERR+E+A E  RY D+ RW  
Sbjct: 444 REALNALRARP-GV------GMPPVTADGKEAFRTMVRNERRVELAFEEHRYWDVRRWMT 496

Query: 485 AEKVMNRKTYGI 496
              + N    G+
Sbjct: 497 GMDLFNSAVRGV 508