Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 575 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  122 bits (307), Expect = 3e-32
 Identities = 167/610 (27%), Positives = 251/610 (41%), Gaps = 74/610 (12%)

Query: 1   MKKLLLYIGAGILLLSACHD--LNLNPLSSGSTENWYSTETEVQMAVDELYR---YDF-- 53
           MK +   +   + L SAC D  L+  PL S + E ++ TE++++ A+   Y    Y+   
Sbjct: 1   MKNIKYSLILALFLFSACDDEFLDKYPLDSVTHETYWETESQLRAALYPCYEGLDYELLI 60

Query: 54  WPEDGQQQTDWSDDYTSRDLLTSFDDGTLNGQNAWVTSLWGNQYKAISRANAVIEKSHRA 113
           +P        W D  +    +       L+G     TS W   Y  I   N  ++   +A
Sbjct: 61  YPNVFGGDVVWGDLNSGLAKIPGGRHTALDGFP--FTSFWSWLYAPIFTCNNFLDHYDKA 118

Query: 114 IENGASATTINRLIAEAKFHRAAAYAKLIVKFGDLPLVLTDVSTEEGLTMGRTDKSIVLA 173
                   T +   AE K  RA  Y  L   +GD+PLV   ++  E   M RT +  V+ 
Sbjct: 119 ---NVDQDTKDVYAAEVKVIRALQYFWLTSYWGDVPLVDKVINASEAY-MPRTPREEVVQ 174

Query: 174 QIYKDFDDAISVLPT---SYTDQQRATQGAALALKARVALIMEDWETAADAAKAVMDLNI 230
            I  D D A S L     S  D  R  +  ALA+KARVAL  E WE AA+ AK +MD + 
Sbjct: 175 FIMDDLDWAASKLGEEIPSGDDVGRINRWGALAVKARVALQNEMWEVAANTAKEIMDNSP 234

Query: 231 YELHPDFGNLF-LSTTKNSNEFIFKIPRDATYDIY-LGTGNGGVNQVYNDLPRNVGGWTQ 288
           Y L+ ++G+++ L+    +N      P +    IY L   +   N + N     V  + +
Sbjct: 235 YALYSNYGDMYKLAGNAETN------PANREAIIYSLFVEDLRTNNLSNYTCTPV-DYIR 287

Query: 289 TCPSWELLAAFTCTD-----------GLLINESPLFD-PHEPFA----NRDPRLAETIVP 332
              S  L+ AF CTD           G  I  S L++ P E +A    NRDPRL  T+  
Sbjct: 288 LNASKRLVDAFLCTDGKPAKAGLEYYGQSIATSELYNYPEEHYADYFENRDPRLKMTVYS 347

Query: 333 FGSNHL-GYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYASFDGLVWKK--GIDETWLQ 389
            G     G + +P  +    +       V   + R  A      G   KK   I+   L 
Sbjct: 348 PGDEWPGGDDGDPDTDTANEIYQLPRFAVLQNNNRLGAN--GLTGFYLKKYNSIELAGLY 405

Query: 390 NGFKVDQDIIYCRYAEILLTYAEAKIELN-------EIDNSVLDALNEVRARAYGVDKSD 442
           N  +   +I   RY EILL YAEA   +        +ID +V      V      +D+ +
Sbjct: 406 N--RDHNNINVIRYPEILLIYAEALFNIQGGTLTQAQIDMTVNQLRERVNMHPMNLDELN 463

Query: 443 KASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVMNRKTYGILYPASL 502
                         L  +L  ERR+EM+ + MRY D++RW+  E  + +   G      +
Sbjct: 464 AWGL---------DLETELHRERRVEMSMDGMRYFDVLRWEEGEIHLGKAMVG--PSLEV 512

Query: 503 CIERVTSQGDWFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYLWPIPTTELQI 562
           C+  + +         P+   D   D   + E    +         + YLWP+P  E   
Sbjct: 513 CMNDLGANP------YPDNGTDEFGDI--IYEKSVAEGGLDHFDPSKHYLWPVPYAERIK 564

Query: 563 NENLKQNPGY 572
           N +L QNPG+
Sbjct: 565 NPDLGQNPGW 574