Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 533 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  166 bits (420), Expect = 2e-45
 Identities = 161/600 (26%), Positives = 262/600 (43%), Gaps = 97/600 (16%)

Query: 1   MKKLLLYIGAGILLLSACHDL--NLNPLSSGSTENWYSTETEVQMAVDELYRYDFWPE-- 56
           MKK++  I   ++ +S C       +P ++  TE +++ E +++      + YD +    
Sbjct: 3   MKKIVCIIVL-VITMSGCESFLDKTDPTATSFTE-FFNDEDDLRRVTYSSF-YDVFTHHS 59

Query: 57  ---------DGQQQTDWSDDYTSRDLLTSFDDGTLNGQNAWVTSLWGNQYKAISRANAVI 107
                    DG+    ++ D++  D   +  +GTLN  +  +   +    K + R N  I
Sbjct: 60  NRRSLLYMLDGRSDNAYARDFS--DHHQAIANGTLNASSIGMEYYYATYMKHVGRLNTYI 117

Query: 108 EKSHRA-IENGASATTINRLIAEAKFHRAAAYAKLIVKFGDLPLVLTDVSTEEGLTMGRT 166
           +  +   +EN    T    ++   K  R   Y +L   +GD+P +L   + ++     R 
Sbjct: 118 DNINEPYVENETIRTRYENIL---KGLRMWHYLRLTFYWGDVPFMLDPANLDDARQPARP 174

Query: 167 DKSIVLAQIYKDFDDAISVLPTS-YTDQQRATQGAAL-ALKARVALIMEDWETAADAAKA 224
            K  +L  I+    +    LP   YT  +      +L A+  R AL  E +E AA  AK 
Sbjct: 175 -KEEILEIIFPMAVEIAEQLPIDEYTSNKYMFNQLSLKAVIMRYALYHERYELAASLAKE 233

Query: 225 VMDLNIYELHPDFGNLF-LSTTKNSNEFIFKIPRDATYDIYLGTGNGGVNQVYNDLP--- 280
           ++D   Y LHP +G+LF      N+NEFI  +  ++         +G     + DL    
Sbjct: 234 IIDSGNYSLHPSYGDLFQYEAASNNNEFIVHLDEESH--------SGSTTYSFRDLGPHF 285

Query: 281 RNVGGWTQTCPSWELLAAFTCTDGLLINESPLFDPHE----PFANRDPRLAETIVPFGSN 336
           R   G +   P   L+ ++    G  I + PL    E    P  NRDPR   +I+  G  
Sbjct: 286 RTGNGQSYCVPLKSLVDSYWTLQGRPIEDCPLHTKEEYELNPNLNRDPRYEASIMGHGDV 345

Query: 337 HLGYEYNPHPEALTCMNYNTGEIVTNYDTRANAQYASFDGLVWKKGIDETWLQNGFKVDQ 396
             G       E +   N N      N       Q AS  G  +KK + E        ++ 
Sbjct: 346 FYG-------EPIDIYNSNNPMFYEN-------QRASKSGYWFKKFVSENDAFRNGNMEY 391

Query: 397 DIIYCRYAEILLTYAEAKIELNEIDNSVLDALNEVRARAYGVDKS----DKASYPAFTSN 452
            ++  RYAE+LLTYAEAKI + E+D    + +N+VR RA G+D +    +  SY ++   
Sbjct: 392 GLL--RYAEVLLTYAEAKIMMGEVDALTKECINQVRERA-GLDMTVADVNLPSYNSYVQE 448

Query: 453 DQSTLRHQLRVERRMEMAKEHMRYTDIIRWKLAEKVMNRKTYGILYPASLCIERVTSQGD 512
           D  TL   ++ ERR+E A E +RY D++RW++AE V+N+   G                 
Sbjct: 449 DWMTL---IQNERRVEFAGEGLRYADLLRWRIAEDVLNQPALG----------------- 488

Query: 513 WFWAFTPEMDEDGCADFSKLEEAGKCQALAVRSWNDRQYLWPIPTTELQINENLKQNPGY 572
                    +E+G     K+E+         R+++  QY WP P + L++N  LKQNPGY
Sbjct: 489 ------HTREENGQMTSLKIED---------RTFSSHQYRWPFPESSLKVNPGLKQNPGY 533