Pairwise Alignments

Query, 572 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 593 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  131 bits (330), Expect = 7e-35
 Identities = 161/635 (25%), Positives = 265/635 (41%), Gaps = 108/635 (17%)

Query: 1   MKKLLLYIGAGILLLSACHD--LNLNPLSSGSTENWYSTETEVQMAVDELYRYDF----- 53
           MKK+ + I     L  +C+D  ++  PL   + EN++ T  ++++  +  Y  D+     
Sbjct: 1   MKKIYITIACLAGLFWSCNDEFMDRYPLDQITDENFWKTAQDLELYCNSFYP-DYITGFG 59

Query: 54  --W------PEDGQQQTDWSDDYTSRDLLTSFDDGTLNGQNAWVTS-------LWGNQYK 98
             W      P    +   + D  T      S+     N  NA+V          WGN   
Sbjct: 60  TGWGTSTVAPYGYNEAIAYGDVITDNAAPESYSKVAANQYNAYVGGGSGSSGWSWGN--- 116

Query: 99  AISRANAVIEKSHRAIENGASATTINRLIAEAKFHRAAAYAKLIVKFGDLPLVLTDVSTE 158
            I + N  ++   R      +    N  + E  F +A  Y K +  FGD+P +   + T 
Sbjct: 117 -IRQLNYFLDNYKRG---NVAEDVRNVYLGEVLFFKAWDYFKKVKTFGDVPWITHALETN 172

Query: 159 -EGLTMGRTDKSIVLAQIYKDFDDAISVLPTSYTDQ-QRATQGAALALKARVALIMEDWE 216
            + L   R  + +V+  I    D +I+ LP    ++  R  +  AL LK+R+ L    + 
Sbjct: 173 SQELYAPRDPREVVMDSIMHILDQSIAFLPAKGEEKTDRLHKDVALHLKSRIGLYEGTYR 232

Query: 217 ---------------TAADAAKAVMDLNIYELHP------DFGNLFLSTTKNSNEFIFKI 255
                           +A+A++ +M    Y L+       D+ +LF + +   N  +  +
Sbjct: 233 KYHPELGLDGAAFLRASAEASEQLM-AGGYSLYTTGNPTTDYNDLFATYSYEDNPEVI-L 290

Query: 256 PRDATYDIYLGTGNGGVNQVYNDLPRNVGGWTQTCPSWELLAAFTCTDGLLINESPLF-- 313
            R+ + D+  G      ++ Y    R+  G T+      L+  + C DGL I++SPLF  
Sbjct: 291 WREYSADLTYGVA---FSRYYAQNLRHKHGATRN-----LVDEYLCEDGLPISQSPLFMG 342

Query: 314 --DPHEPFANRDPRLAETIVPFGSNHL--GYEYNPHPEALTCMNYNTGEIVTNYDTRANA 369
                    NRDPRL +T+  FG+ +L  G +   +         N  +  T Y     A
Sbjct: 343 KDSIQSEMMNRDPRLPQTVANFGTYNLQAGVQGANNAPLPNIPGLNGNKCPTGYRV---A 399

Query: 370 QYASFDGLVWKKGIDETWLQNGFKVDQDIIYCRYAEILLTYAEAKIELNEIDNSVLD-AL 428
           ++   D   W +      + NG    Q  +  RYAE+L+ YAEAK EL E+D  VLD  +
Sbjct: 400 KWFLNDPADWDR------VTNGM---QAAVIFRYAEVLVNYAEAKYELGELDQGVLDNTI 450

Query: 429 NEVRARA---------YGVDKSDKASYPAFTSNDQSTLRHQLRVERRMEMAKEHMRYTDI 479
           N +RAR             D +   +Y  +       +  ++R ERR+E+A E  R+ D+
Sbjct: 451 NLIRARVDMPPLTLGNIPADPALDGNYAMYCDYVPEPVLREIRRERRVELAFESFRWDDL 510

Query: 480 IRWKLAEKVMNRKTYGILYPASLCIERVTSQGDWFWAFTPEMDEDG--CADFSKLEEAGK 537
           +RWK A K +     GI +        V    D F      + EDG     +  L +   
Sbjct: 511 MRWK-AGKFLEIPVEGIKFVQEQ-FPTVVVDKDVF------LSEDGYILPYYQTLPDGRT 562

Query: 538 CQALAVRSWNDRQYLWPIPTTELQINENLKQNPGY 572
                     ++QYL+PIP  +L +N NL+QNPG+
Sbjct: 563 FD-------EEKQYLFPIPIEDLVLNTNLEQNPGW 590