Pairwise Alignments

Query, 446 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 464 a.a., sigma-54-dependent Fis family transcriptional regulator from Ralstonia solanacearum PSI07

 Score =  313 bits (803), Expect = 6e-90
 Identities = 173/447 (38%), Positives = 260/447 (58%), Gaps = 6/447 (1%)

Query: 1   MSKILIIDDEVQIRSLLARMLGLEGYEVCQAGDCKAAIRQLEIQQPDVALCDVFLPDGNG 60
           M  ILI++D+V  R+ L  ++  EG+   QAG  + A  Q+    PD  L D+ LPDGNG
Sbjct: 1   MPHILIVEDDVSARAALGELVSAEGFTTAQAGSLRDARIQISRHSPDAVLIDLVLPDGNG 60

Query: 61  VDLVLNIKKTAPNVEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPLISRAVEKA 120
           +DL+ +I   +   E+I++T H ++   V+A++ GA DY+ K  +  ++  +++R     
Sbjct: 61  MDLMEDIPSHS-GTEIIVMTGHASVETAVEALRMGAADYLVKPVNFQRLKSILARIPRPG 119

Query: 121 KMNVRLEKLEKKVSQLYSFDSILGESKVLKEAVMLAQKVSVTDVPVLLTGETGTGKEVFA 180
            +   +  L  ++ +L  F  +LG S  ++       +V+ T+  VLL GE+GTGKE+ A
Sbjct: 120 DLKAEIGNLRGELRRLGLFGQMLGNSPAMQTLYDQVSRVAPTEATVLLIGESGTGKELAA 179

Query: 181 QAIHYNSKRSKQSFVAVNCSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEANNGTIFL 240
           Q IH  S R KQ F+ VNC + S  L+ESEMFGH+ GSFTGA +  KG FE AN GT+ L
Sbjct: 180 QTIHDLSLRRKQPFLPVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLLL 239

Query: 241 DEIGEMAFELQAKLLRILETGEYIKIGDTKPTHVNVRIIAATNRNLTEEIKAGRFREDLF 300
           DEI EM  ELQ KLLR+LETG ++++G  +    +VR+IAATNR+  E +  G+ R DL+
Sbjct: 240 DEITEMPVELQVKLLRVLETGVFMRVGTNREIDTDVRVIAATNRDPEEAVADGKLRADLY 299

Query: 301 YRLSVFQVHLPALRERTGDIRILATAFAKSFSEKLSYTVNEMTPAFLHALEQQPWKGNIR 360
           +RL+VF + LP LRER  D+ +LA  F    + + + +     P  +  L    W GN+R
Sbjct: 300 HRLNVFPLQLPPLRERGKDVELLAQHFLDQLNAQ-NNSKKTFLPQAMDTLRAYNWPGNVR 358

Query: 361 ELRNVIERSLIVCEGGHLDVCDLPLEIQNTHYECSDD---NIGSFELAAMERRHIARVLE 417
           ELRN ++R+ I+ +   +    +PL+I  T           +G+  LA+ +++ I   LE
Sbjct: 359 ELRNYVQRAYIMADDTGISTEAVPLQISTTQASSGSTLTIPVGT-SLASADKKIILATLE 417

Query: 418 YTKGNKTETARLLKIGLTTLYRKIEEY 444
              G K   A LL I L TLY ++EEY
Sbjct: 418 QCGGVKKRAAELLGISLKTLYNRLEEY 444