Pairwise Alignments

Query, 446 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 467 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  313 bits (802), Expect = 7e-90
 Identities = 176/446 (39%), Positives = 257/446 (57%), Gaps = 4/446 (0%)

Query: 1   MSKILIIDDEVQIRSLLARMLGLEGYEVCQAGDCKAAIRQLEIQQPDVALCDVFLPDGNG 60
           M  +LI+DD+   R  LA ++  +G     AGD + A  QL  Q PDV   D+ LPDG G
Sbjct: 1   MPHVLIVDDDPSTREALAAIIAEDGLTTATAGDLREARIQLVRQMPDVVFTDLKLPDGTG 60

Query: 61  VDLVLNIKKTAPNVEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPLISRAVEKA 120
           VDL  ++   +  VE +++T H  +   V A+K GA DY+ K  +  ++  +++R     
Sbjct: 61  VDLFEDLDPRS-GVEFVVITGHATVESAVSALKMGAADYLVKPINMQRVKSILARLPRAG 119

Query: 121 KMNVRLEKLEKKVSQLYSFDSILGESKVLKEAVMLAQKVSVTDVPVLLTGETGTGKEVFA 180
            +   +  L  ++ ++  F  +LG S V+++      +V+ T   V+L GE+GTGKEV A
Sbjct: 120 DLKAEIGTLRGELRRMGRFGLMLGNSGVMQQVYDQISRVAPTAASVMLVGESGTGKEVAA 179

Query: 181 QAIHYNSKRSKQSFVAVNCSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEANNGTIFL 240
           Q +H  S R K +F+AVNC + S  L+ESEMFGH+ G+FTGA +  KG FE AN GT+FL
Sbjct: 180 QTLHQLSLRRKHAFLAVNCGAISPNLIESEMFGHERGAFTGADRQHKGYFERANGGTLFL 239

Query: 241 DEIGEMAFELQAKLLRILETGEYIKIGDTKPTHVNVRIIAATNRNLTEEIKAGRFREDLF 300
           DEI EM  ELQ KLLR+LETG ++++G TK    +VR+IAATNR+  + +  G+ R DL+
Sbjct: 240 DEITEMPIELQVKLLRVLETGMFMRVGTTKEIETDVRLIAATNRDPEQAVLEGKLRLDLY 299

Query: 301 YRLSVFQVHLPALRERTGDIRILATAFAKSFSEKLSYTVNEMTPAFLHALEQQPWKGNIR 360
           +RL+VF + LP LRER  D+ +LA +F    +E+ + T     PA    L   PW GN+R
Sbjct: 300 HRLNVFPISLPPLRERGKDVELLAQSFLDELNEQHA-TKKHFPPAVREMLLSYPWPGNVR 358

Query: 361 ELRNVIERSLIVCEGGHLDVCDLPLEIQNTHYECSDDNIGSF--ELAAMERRHIARVLEY 418
           EL+N ++R+ I+          +PL+I  +           F   LA  +R+ I   LE 
Sbjct: 359 ELKNYVQRAHIMSGTDSDSTATVPLQISLSKPTAGTAITIPFGTSLAEADRQLILATLEQ 418

Query: 419 TKGNKTETARLLKIGLTTLYRKIEEY 444
             G KT  A +L I L TLY ++ EY
Sbjct: 419 CGGVKTRAAEILGISLKTLYNRLVEY 444