Pairwise Alignments

Query, 446 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 463 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  292 bits (748), Expect = 1e-83
 Identities = 163/447 (36%), Positives = 250/447 (55%), Gaps = 4/447 (0%)

Query: 1   MSKILIIDDEVQIRSLLARMLGLEGYEVCQAGDCKAAIRQLEIQQPDVALCDVFLPDGNG 60
           M   LI+DD+   R+ LA M+  +G     A D + A  QL  Q PDV  CD++LPDG G
Sbjct: 1   MVHALIVDDDPDSRNALAAMIAEDGLTTATASDLREARIQLVRQVPDVVFCDLYLPDGTG 60

Query: 61  VDLVLNIKKTAPNVEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPLISRAVEKA 120
            DL  ++      VE +++T    +   V A+K GA DY+ K  D  ++  ++ R     
Sbjct: 61  ADLFEDLDPHQ-GVEFVIVTGRATVESAVDALKMGASDYLVKPVDLQRVKAILGRLPRTG 119

Query: 121 KMNVRLEKLEKKVSQLYSFDSILGESKVLKEAVMLAQKVSVTDVPVLLTGETGTGKEVFA 180
            +   +  L  ++ ++     + G S  +++      +V+ T + V+L GE+GTGKEV A
Sbjct: 120 DLKAGIGTLRGELRRMGRLGLMSGSSPAMQKIYAQIARVAPTALSVMLVGESGTGKEVAA 179

Query: 181 QAIHYNSKRSKQSFVAVNCSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEANNGTIFL 240
           Q +H  S R++  F+AVNC + S+ L+ESEMFGH+ G+FTGA +  +G FE AN GT+FL
Sbjct: 180 QTLHQLSARNRHDFLAVNCGAISRNLIESEMFGHERGAFTGAERQHRGYFERANGGTLFL 239

Query: 241 DEIGEMAFELQAKLLRILETGEYIKIGDTKPTHVNVRIIAATNRNLTEEIKAGRFREDLF 300
           DEI EM   LQ KLLR+LETG ++++G T     +VR+IAATNR+  + +  G+ R DL+
Sbjct: 240 DEITEMPIGLQVKLLRVLETGMFMRVGTTAEISTDVRLIAATNRDPEKAVAEGKLRLDLY 299

Query: 301 YRLSVFQVHLPALRERTGDIRILATAFAKSFSEKLSYTVNEMTPAFLHALEQQPWKGNIR 360
           +RL+V  + LP LRER  DI +LA +F    +++   T      A    L    W GN+R
Sbjct: 300 HRLNVVPISLPPLRERGNDIELLAQSFLDELNDQHG-TKKHFPTAIKDTLLSYRWPGNVR 358

Query: 361 ELRNVIERSLIVCEGGHLDVCDLPLEIQNTHYECSDDNIGSF--ELAAMERRHIARVLEY 418
           EL+N ++R+ I+      +   +P++I    +         F   L  ++R+     LE+
Sbjct: 359 ELKNYVQRAYIMSRPDTHETAIVPVQISPDPFAVRSTVTIPFGTALEDVDRQLKLATLEH 418

Query: 419 TKGNKTETARLLKIGLTTLYRKIEEYK 445
             GN+T  A +L I L T+Y ++ EYK
Sbjct: 419 CGGNRTRAAEVLGISLKTIYNRLSEYK 445