Pairwise Alignments

Query, 1010 a.a., multidrug efflux membrane fusion protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1044 a.a., acriflavine resistance protein B from Rhodanobacter sp. FW510-T8

 Score =  572 bits (1473), Expect = e-167
 Identities = 329/1019 (32%), Positives = 563/1019 (55%), Gaps = 26/1019 (2%)

Query: 1    MNISELSIRRPVLATVLTIIILLFGFIGYSYLGVREYPSVDNPIISVSCSYPGANADVIE 60
            MNI EL IRRPV+ T+L   +L+FG   Y  L V E P+VD P IS+S + PGA+ + + 
Sbjct: 1    MNIPELCIRRPVMTTLLMTALLVFGLAAYPQLPVNELPNVDFPTISISANLPGASPETMA 60

Query: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120
            + +  PLE  ++ I GI S+SS S  G + IT+ F L  +++ AA DV+  +S A R LP
Sbjct: 61   SAVATPLEGRLSTIAGISSMSSTSALGSTSITLSFALDRNIDAAAQDVQSAISSALRQLP 120

Query: 121  RDCD-PPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGE 179
            ++   PPT  K +     IL +A+ S    L ++ E A+  + +QL  I  V+ V+++G 
Sbjct: 121  KEMTTPPTFRKVNPADAAILYLAMSSSTLPLTQVDEYAETELAQQLSMIEGVAQVNVYGS 180

Query: 180  KRYSMRLWLDPVKMAGYGITPIDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADE 239
            ++Y++R+ +DP ++A  GI    V+NA+   NV   +GS+ G   +L IR+ G +  A  
Sbjct: 181  QKYAVRIGVDPNRLAAAGIGIDRVQNAIAEANVNQSTGSLYGKRQQLPIRSDGQLLRAAA 240

Query: 240  FNNLIVKEDNNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAV 299
            +N+++V   N   V   DIGRA     D +     NG   + + +  QPGAN +   D +
Sbjct: 241  YNDVVVAYRNGAPVHVGDIGRARDSVQDDQRSSSYNGKQAIVLAIQRQPGANTVATVDRI 300

Query: 300  YKRMEQMKKDLPEDVTYSYGFDNTKFIRASINEVKETVYVAFILVIIIIFLFLRDWRVTL 359
               +   +  LP  +T    +D ++ IR S+++V+ T+ +A  LV+ +I+LFL +   TL
Sbjct: 301  MAVLPNFRAGLPPSITLDTLYDRSQSIRDSVDDVQFTLLLAGALVVFVIYLFLGNLSATL 360

Query: 360  VPCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLAVGLVVDDAIVMTENIYIRIEKGMSP 419
            +P + +P+S++G F VMY  G+S++ LS+LA+ LAVG VVDDAIVM ENI   +E G+ P
Sbjct: 361  IPAVALPISVLGTFGVMYALGYSLDNLSLLALTLAVGFVVDDAIVMLENIVRHMEAGVPP 420

Query: 420  KEAGIEGAKEIFFAVISTTITLVAVFFPIVFMQGMTGRLFREFSIVISGSVIISSFAALT 479
             +A ++GA E+ F + S T++L+AVF P++FM G+ GRLF EF++VIS +++IS   A+T
Sbjct: 421  YQAALKGAGEVGFTIFSMTLSLIAVFIPVMFMGGIVGRLFHEFAVVISVAILISGIVAIT 480

Query: 480  FTPMLATKLLIKRE-------KQNWFYTKTEPFFEGMNRWYSRSLAAFLRKRWLALPFTF 532
             TPML ++ +   +       ++NW     +  F  + R Y+ SL   + +  L L    
Sbjct: 481  LTPMLCSRFVKAHDHDGPDQSRKNWLIAGFDRGFGAVQRGYASSLRWCMERPRLVLAGFG 540

Query: 533  ITICLIGFLWNAIPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPDAE 592
            +++     L+  +P +  P  D  Q+ +NT G E V+++ +    +   +LVD +  D  
Sbjct: 541  LSLLATALLFYVVPKDFIPAGDNGQLRVNTEGPEDVSFDGMLARQQ---RLVDIVAKDPN 597

Query: 593  ---------AVTARVSSGSGNVRITLKDMKDRDYTQMEVAEKISKAVQKKTMARSFVQQQ 643
                     A  AR +  +G++ + LK   +R  +   + +++   +      RS++Q  
Sbjct: 598  IAGYMSTVGAGGARSTINNGSILLLLKPAHERKLSPDGIIQELRPKLATVAGIRSYIQNA 657

Query: 644  SS--FGGRRGSMPVQYVLQATNLEKLQEVLPQFMAKVYENPVFQMADVDLKFSKPEARIR 701
             +   GGR+     QY LQ+ +L++L E   +        P F+    DL  + P   ++
Sbjct: 658  PAIQIGGRQSKAQYQYTLQSVSLDQLYEWSGKVTRAFAALPGFEDVTNDLDLNSPSIMVK 717

Query: 702  INRDKASVMGVSTKNIAQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIY 761
            ++R K + +G++   +   L  G    ++   Y +  QY ++ ++ R+ ++ PA L  +Y
Sbjct: 718  VDRAKLAPLGLTMAQVQAALGIGFGQNQVSTIYGSATQYWVILQVERRLQDDPAVLSQLY 777

Query: 762  IRSSNGDMIQLDNLIELENGIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKE 821
            + S++G ++ L  +           +    +  + T+S  LA G ++   +  ++  A +
Sbjct: 778  VTSNSGSLVPLSAVAGFSREPQALTVNHQGQLPAVTVSFNLAPGVSLSDAVTSING-AMD 836

Query: 822  T--LDDTFRTALSGDSKEYRESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPL 879
            T  L  T   ++ G ++ +++S   +    +LA+ +IYL+L   +ESF  PL I+  +P 
Sbjct: 837  TMGLPATISGSVQGTAQAFQQSMQGMGMLLLLAVFVIYLVLGILYESFIHPLTILSGLPA 896

Query: 880  AIAGALVFMYFGDITMNIFSQIGIIMLIGLVAKNGILIVEFANQKQ-EAGEDKMSAIKDA 938
            A  GAL+ +     ++++F+ +GI+MLIG+V KN I++++FA ++Q E G     AI DA
Sbjct: 897  AAVGALLTLAIFHASLDLFAFVGIVMLIGIVKKNAIMLIDFALERQREEGMSPAQAIADA 956

Query: 939  ALQRLRPILMTSASTVLGLIPLAFASGEGANQRIAMGTAVVGGMVVSTLLTMYIVPAIY 997
               R RPI+MT+ +   G +P+A   G GA  R ++G AVVGG+V S +LT+Y+ P IY
Sbjct: 957  CRVRFRPIMMTTMAAFAGTLPIALGIGAGAEVRRSLGLAVVGGLVFSQVLTLYLTPVIY 1015