Pairwise Alignments

Query, 1010 a.a., multidrug efflux membrane fusion protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1010 a.a., RND transporter, HAE1 family from Bacteroides ovatus ATCC 8483

 Score = 1887 bits (4887), Expect = 0.0
 Identities = 974/1010 (96%), Positives = 998/1010 (98%)

Query: 1    MNISELSIRRPVLATVLTIIILLFGFIGYSYLGVREYPSVDNPIISVSCSYPGANADVIE 60
            MNISELSIRRPVLATVLTIIILLFGFIGY+YLGVREYPSVDNPIISVSCSYPGANADVIE
Sbjct: 1    MNISELSIRRPVLATVLTIIILLFGFIGYNYLGVREYPSVDNPIISVSCSYPGANADVIE 60

Query: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120
            NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP
Sbjct: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120

Query: 121  RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK 180
            RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK
Sbjct: 121  RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK 180

Query: 181  RYSMRLWLDPVKMAGYGITPIDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADEF 240
            RYSMRLWLDPVKMAGYGITP+DVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADEF
Sbjct: 181  RYSMRLWLDPVKMAGYGITPVDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADEF 240

Query: 241  NNLIVKEDNNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAVY 300
            N+LIVKE+NNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAVY
Sbjct: 241  NDLIVKEENNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAVY 300

Query: 301  KRMEQMKKDLPEDVTYSYGFDNTKFIRASINEVKETVYVAFILVIIIIFLFLRDWRVTLV 360
            +RMEQMKKDLPEDV Y+YGFDNTKFIRASINEVK TVY AF+LVIIIIFLFLRDWRVTLV
Sbjct: 301  QRMEQMKKDLPEDVHYNYGFDNTKFIRASINEVKSTVYEAFVLVIIIIFLFLRDWRVTLV 360

Query: 361  PCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLAVGLVVDDAIVMTENIYIRIEKGMSPK 420
            PCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVL+VGLVVDDAIVMTENIYIRIEKGM+PK
Sbjct: 361  PCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLSVGLVVDDAIVMTENIYIRIEKGMAPK 420

Query: 421  EAGIEGAKEIFFAVISTTITLVAVFFPIVFMQGMTGRLFREFSIVISGSVIISSFAALTF 480
            EAGIEGAKEIFFAVISTTITLVAVFFPIVFM GMTGRLFREFSIVISGSVIISSFAALTF
Sbjct: 421  EAGIEGAKEIFFAVISTTITLVAVFFPIVFMDGMTGRLFREFSIVISGSVIISSFAALTF 480

Query: 481  TPMLATKLLIKREKQNWFYTKTEPFFEGMNRWYSRSLAAFLRKRWLALPFTFITICLIGF 540
            TPMLATKLLIKREKQ+WFY KTEPFFEGMNR YSRSLAAFL KRW+ALPFTFITICLIG 
Sbjct: 481  TPMLATKLLIKREKQSWFYAKTEPFFEGMNRLYSRSLAAFLSKRWIALPFTFITICLIGI 540

Query: 541  LWNAIPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPDAEAVTARVSS 600
            LWNA+PAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPDAEAVTARVSS
Sbjct: 541  LWNAVPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPDAEAVTARVSS 600

Query: 601  GSGNVRITLKDMKDRDYTQMEVAEKISKAVQKKTMARSFVQQQSSFGGRRGSMPVQYVLQ 660
            GSGNVRITLKDM +R+YTQM+VAEKISKAVQKKTMARSFVQQQSSFGGRRGSMPVQYVLQ
Sbjct: 601  GSGNVRITLKDMNERNYTQMDVAEKISKAVQKKTMARSFVQQQSSFGGRRGSMPVQYVLQ 660

Query: 661  ATNLEKLQEVLPQFMAKVYENPVFQMADVDLKFSKPEARIRINRDKASVMGVSTKNIAQT 720
            ATNLEKL+EVLP+FMAKVYENPVFQMADVDLKFSKPEARI+INRDKAS+MGVSTKNIAQT
Sbjct: 661  ATNLEKLEEVLPKFMAKVYENPVFQMADVDLKFSKPEARIQINRDKASIMGVSTKNIAQT 720

Query: 721  LQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIYIRSSNGDMIQLDNLIELEN 780
            LQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIY+RSS+GDMIQLDNLIELE+
Sbjct: 721  LQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIYVRSSSGDMIQLDNLIELES 780

Query: 781  GIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFRTALSGDSKEYRE 840
            GIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFRTALSGDSKEYRE
Sbjct: 781  GIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFRTALSGDSKEYRE 840

Query: 841  SSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMYFGDITMNIFSQ 900
            SSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMYFGDITMNIFSQ
Sbjct: 841  SSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMYFGDITMNIFSQ 900

Query: 901  IGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILMTSASTVLGLIPL 960
            IGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILMTSASTVLGLIPL
Sbjct: 901  IGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILMTSASTVLGLIPL 960

Query: 961  AFASGEGANQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYISTNRIKITKE 1010
            AFA+GEG NQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYISTNRIK  +E
Sbjct: 961  AFATGEGCNQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYISTNRIKKLQE 1010