Pairwise Alignments

Query, 225 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 239 a.a., LPS export ABC transporter ATP-binding protein from Rhodanobacter sp. FW510-T8

 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 22/219 (10%)

Query: 4   LLEIDSIIKNFGTRQLLTDVYLKINTGDVIGLFGRNGTGKSVLMQIIFGTMKADRKFIRL 63
           +L  + + K+F +RQ++ D    I  G+V+GL G NG GK+    ++ G ++AD   IRL
Sbjct: 1   MLSAEGLQKSFKSRQVVRDFGFSIREGEVVGLLGPNGAGKTTCFYMVVGLIEADGGTIRL 60

Query: 64  DECKVLSAPYQHART---IAFLPQQGYLPKHEKINKLVDCYLD-ANVVPYFYEDDEVAQS 119
           D+  +   P  HAR+   I +LPQ+  + +   +   +   L+  N +     + E+   
Sbjct: 61  DKTDITGLP-MHARSRLGIGYLPQEASVFRRLSVADNILAVLELRNGLSAQQRNGELENL 119

Query: 120 CMERRVS--------QLSGGERRYLEAKLLLLGNAKFVLLDEPF---DYLSFHLVDKLIG 168
             E ++          LSGGERR +E    L  N +++LLDEPF   D +S   + +++ 
Sbjct: 120 LDELKIEHIAGQKGVSLSGGERRRVEIARALAANPRYMLLDEPFAGVDPISVGEIQRIV- 178

Query: 169 LIKKHSEEKGI--VIADHNYEKVLEVVNRLVLIREGVLM 205
              +H +E+GI  +I DHN  + L + +R  ++ EG ++
Sbjct: 179 ---RHLKERGIGVLITDHNVRETLGICDRAYILNEGEVL 214