Pairwise Alignments

Query, 897 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1155 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 99.0 bits (245), Expect = 2e-24
 Identities = 93/329 (28%), Positives = 164/329 (49%), Gaps = 28/329 (8%)

Query: 14  LVLIGMVILITAQAY-AQNANARLTITLRNATLKEFVKLIENSTGYSFIYS-EEISISHK 71
           +VLI +  L   QAY A   N ++T+ +++  L+  +  IE+ T + FIYS +E++ +  
Sbjct: 31  MVLIFLTTLNPIQAYSAYGQNEKVTLDVKDKPLEAVLYQIESQTSFKFIYSNDELNAAET 90

Query: 72  INLKVKDMPLHEILDLVFKDEPISYK-FSERYILLQKKRVQKP----VSRKFTISGYVTD 126
           I L V+D PL E+L+++F    I Y+   +  I+L+KK    P    V +  TI+G VTD
Sbjct: 91  ITLSVQDKPLEEVLNVLFNPRKIEYQIIMDTQIVLKKKADNDPNESLVLQAVTITGTVTD 150

Query: 127 GTSSETLIGTNIIESHQYQGTTTNPYGFYSITLPEGETELRFSYLGYTTETHHFTLAQDT 186
             +   L G +I+E     GT  +  G +++ +   +  L+ SYLG+  +   + L   T
Sbjct: 151 -KNGAPLPGASILEKGTNNGTVADIDGHFTLEVSAADAVLKISYLGFIAQ--EYPLNGKT 207

Query: 187 LLNIRMKGNAQ-LEEVVVVS-DKAEAGTVATQMGAVEIPMVQIKNTPSILG--ESDVMKA 242
            +NI ++ +   L+EV+VV     +   +   +  V+  +++ +   S+ G  +  +   
Sbjct: 208 TINITLEEDVTGLDEVIVVGYGSQKRSNITGAVAEVKGDVLEGRVISSVAGGLQGLIPGL 267

Query: 243 IQLMPGVQAGVDGSAGLYIRG----GSPDQNLILLDGTPVYNVDHMFGFFSVFTPEAIKK 298
               P  Q G  G++ + IRG     S    LIL+DG          G  ++  P+ I+ 
Sbjct: 268 TVTSPSGQPGA-GASNMLIRGVNTINSQTSPLILIDGV-------AGGDINLLNPDDIES 319

Query: 299 VTLFK-SSFPARFGGRLSS-VIDVRTNDG 325
           VT+ K ++  A +G R ++ VI V T  G
Sbjct: 320 VTVLKDAASSAIYGARAANGVILVTTKKG 348