Pairwise Alignments

Query, 897 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1100 a.a., TonB-linked outer membrane protein, SusC/RagA family from Bacteroides ovatus ATCC 8483

 Score = 93.2 bits (230), Expect = 8e-23
 Identities = 117/491 (23%), Positives = 219/491 (44%), Gaps = 61/491 (12%)

Query: 16  LIGMVILITAQAYAQNANARLTITLRNATLKEFVKLIENSTGYSFIYS-EEISISHKINL 74
           L+  ++L++  A A      +T+ L    L   +K IE  T  S +Y+  ++ I+  I++
Sbjct: 12  LLFFLLLVSCFASAYGQERTITLNLSKVPLNTALKEIEKQTSMSVVYNTNDVDINRVISI 71

Query: 75  KVKDMPLHEILDLVFKDEPISYKFSERYILLQKKRVQKPVSRK--FTISGYVTDGTSSET 132
           KV    L+ +++ +F+   +S+   + +I+L  K  ++   +K   T SG VTD +  E 
Sbjct: 72  KVTKESLNNVMNQLFRGVNVSFSIVDNHIVLSAKSNKEEQQKKTPITASGTVTD-SKGEP 130

Query: 133 LIGTNIIESHQYQGTTTNPYGFYSITLPEGETELRFSYLGYTTETHHFTLAQDTLLNIRM 192
           LIG +I+      GT T+  G + I   +G+  L  SY+GY ++T   TLA    + + +
Sbjct: 131 LIGVSILVKGTSNGTITDMDGNFKIQAAKGDV-LEVSYIGYASQT--ITLANAQPIKVTL 187

Query: 193 KGNAQ-LEEVVVVSDKAEAGTVATQMGAVEI---PMVQIKNTPSILGESDVMKAIQLMPG 248
             + Q L+EVVV +   +  T A      E+    +  +K+   +   S  +  +Q+  G
Sbjct: 188 GEDTQVLDEVVVTALGIKRATKALSYNVQEVKGDELTAVKDANFMNSLSGKVAGVQINSG 247

Query: 249 VQAGVDGSAGLYIRGG---SPDQN-LILLDGTPVYNV-----DHMFG------FFSVFTP 293
              G  G+  + +RG    + D N L ++DG P++N      + +FG        +   P
Sbjct: 248 A-TGAGGATRVVMRGMKSLTKDNNALYVIDGVPIFNTGKSGGEGLFGEMGGSDAVADLNP 306

Query: 294 EAIKKVTLFKSSFPARFGGRLSS--VIDVRTNDGDMKKYHGTLSIGLLTSKINLEGPIVK 351
           + I  +++      A   G  ++  V+ + T  G  +K   T+S     SK  +  P ++
Sbjct: 307 DDIASISMMTGPSAAALYGSAAANGVVLITTKKGQTEKTTITVSNSTTFSKAYIM-PDMQ 365

Query: 352 DKTSFNISARRSYIDLIAKPFMPDDEKYNYYFYDINAKINHKFSDRSRLYLSAYNGKDHF 411
           ++   + S   S+ +L  + + P D      F++  + + +  +      LS  N K   
Sbjct: 366 NRYGTS-SGLFSWGELTNRRYNPSD------FFETGSNVINSVA------LSTGNTK--- 409

Query: 412 ATQYDDNSDFKDGSKMNWGNTIISARWN-YIFNNRLFSNTTVSYNNYL-FNVSAYSNNQY 469
                 N  +   S  N G  + +  +N Y F  R   NTT   N+ L  ++ A    QY
Sbjct: 410 ------NQTYLSASTTNSGGILPNNSYNRYNFTAR---NTTHFLNDKLTLDIGA----QY 456

Query: 470 SLTNNTTFINR 480
            + NN   +++
Sbjct: 457 IVQNNKNMVSQ 467