Pairwise Alignments

Query, 897 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1166 a.a., TonB-linked outer membrane protein, SusC/RagA family from Bacteroides ovatus ATCC 8483

 Score = 86.3 bits (212), Expect = 1e-20
 Identities = 86/349 (24%), Positives = 162/349 (46%), Gaps = 33/349 (9%)

Query: 11  IRTLVLIGMVILITAQAYAQNANARLTITLRNATLKEFVKLIENSTGYSFIYSE-EISIS 69
           I+ +  + +  ++    +AQ    ++T+ L++ T+++  + +E     S +Y + ++ ++
Sbjct: 5   IKCMFFVLLAAVLPLSVHAQ----QVTLHLQDVTVRKAFRELEVKGNVSLVYEKNDVDLT 60

Query: 70  HKINLKVKDMPLHEILDLVFKDEPISYKFSERYILLQKKRVQKPVSRKFTISGYVTDGTS 129
            K+ +KV + P+ + LD + K + + YK  + +I++ +  +QK   +K  I+G V+D  +
Sbjct: 61  RKVTVKVDNQPISKALDQILKGQELIYKIKDNHIIITRPVIQKS-DKKRRINGIVSD-VN 118

Query: 130 SETLIGTNIIESHQYQGTTTNPYGFYSITLPEGETELRFSYLGYTTETHHFTLAQDTLLN 189
            E LIG ++       GT +N  G + + +PE   +L+ SY+G+ T+    +  + T  N
Sbjct: 119 DELLIGVSVSIPGTNIGTVSNMEGKFELEIPEDAKKLQVSYIGFDTQEISLSPGK-TTFN 177

Query: 190 IRMKGNAQ-LEEVVVVSDKAE-----AGTVAT---QMGAVEIPMVQIKNTPSILGESDVM 240
           I M  N + L EVVVV    +      G+VAT   +  ++  P+V           S + 
Sbjct: 178 IVMGENVKMLSEVVVVGYGTQKKVNLTGSVATVNLEKESLSRPLVSASQ-----ALSGMT 232

Query: 241 KAIQLMPGVQAGVDGSAGLYIRGGSPDQNLILLDGTPVYNVDHMFGFFSVFTPEAIKKVT 300
             +Q+M       +      IRG        L   +P+  VD M    +   P  I  ++
Sbjct: 233 AGLQVMQSSGTPYNEGFSFNIRGVG-----TLNSSSPLVLVDGMEQSLNNVDPNDIASIS 287

Query: 301 LFKSSFP-ARFGGR-LSSVIDVRTNDGDMKK----YHGTLSIGLLTSKI 343
           + K +   A +G R  + VI V T  G   K    Y+ T S+   T  I
Sbjct: 288 ILKDAASCAIYGNRGANGVILVTTKTGQTGKVSVSYNATFSLNQPTKLI 336