Pairwise Alignments

Query, 718 a.a., elongation factor G (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 704 a.a., protein chain elongation factor EF-G, GTP-binding from Escherichia coli BL21

 Score =  403 bits (1035), Expect = e-116
 Identities = 242/716 (33%), Positives = 383/716 (53%), Gaps = 42/716 (5%)

Query: 10  KNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGYSVFSTVLHV 69
           +NI +     +GKTT  E +LF +GV  + G V       D+   EQE G ++ S     
Sbjct: 11  RNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTA 70

Query: 70  EWNNK-------KLNIIDCPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFRYT 122
            W+         ++NIID PG  DF      ++ V D A+++     GV+  ++  +R  
Sbjct: 71  FWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQA 130

Query: 123 EKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVPIQYPIATGPGFNALIDVLLMKK 182
            K   P I  VN++D    ++  ++ Q+K   G+  VP+Q  I     F  ++D++ MK 
Sbjct: 131 NKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKA 190

Query: 183 YSWKP--EGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQDSLTEDEMRE 240
            +W    +G     EDIPA+ ++ A E H+ L+E+AAE  E LMEK+   + LTE E++ 
Sbjct: 191 INWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKG 250

Query: 241 GIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENT--DGKEVAPDVN 298
            +R+ ++   +  V C    K+ GV+ +++ + + +P   ++P +     DGK+   + +
Sbjct: 251 ALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERH 310

Query: 299 G----PESLYFFKTSVEPHIGEVSYFKVMSGKVREGDDLLNADRGSKERIAQIYVVAGGN 354
                P S   FK + +P +G +++F+V SG V  GD +LN+ + ++ER  +I  +    
Sbjct: 311 ASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANK 370

Query: 355 RVKVEELQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKYSRAIKPVNEADVEK 414
           R +++E++AGDI AA+ LKDV TG+TL   D       +++P    S A++P  +AD EK
Sbjct: 371 REEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEK 430

Query: 415 MMTILNRMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPY 474
           M   L R+ +EDP++ +   +E  QT++ G GE HL  +  R++    ++    +P++ Y
Sbjct: 431 MGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAY 490

Query: 475 RETIT-KAARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTE 533
           RETI  K    + +H KQSGG GQ+G V + + P + G   P  Y+F             
Sbjct: 491 RETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSN-PKGYEF------------- 536

Query: 534 EIPLEWGGKLVFINSIVGGSIDARFLPAIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMH 593
                       IN I GG I   ++PA+ KGI  +L+ GPL G    D+ + ++ G  H
Sbjct: 537 ------------INDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYH 584

Query: 594 PVDSNEISFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDVMGDLQGRRAMIMG 653
            VDS+E++F LA   AF E FK A P +LEPI  VEV  P +  GDV+GDL  RR M+ G
Sbjct: 585 DVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKG 644

Query: 654 MSSEKGFEKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLIK 709
             SE    K+ A+VPL EM  Y+T L SLT GRAS+ M+F  Y+  P++V   +I+
Sbjct: 645 QESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIE 700