Pairwise Alignments

Query, 420 a.a., putative N-acetylmuramoyl-L-alanine amidase amiA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 260 a.a., N-acetylmuramoyl-L-alanine amidase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  224 bits (570), Expect = 3e-63
 Identities = 116/227 (51%), Positives = 153/227 (67%), Gaps = 2/227 (0%)

Query: 49  VVIDAGHGGHDPGAIGKISKEKNINLNVALKLGNLIKKNCDDVKVIYTRSRDVFIPLDRR 108
           VVIDAGHGG D G  GK S E ++ L +A ++G LI++N  DVKV+YTR+ D F+ L  R
Sbjct: 33  VVIDAGHGGKDVGCNGKFSHEADVALRIAKEVGGLIERNVPDVKVVYTRTDDHFVELIDR 92

Query: 109 AEIANNAKADLFISVHTNALAKNRTAKGASTWTLGLAKSDANLEVAKRENSVILYESDYQ 168
           A IAN   ADLFIS+H N+      A G  T+T+GL  SD NL VAKREN+VIL E +Y+
Sbjct: 93  AGIANKNNADLFISIHLNS--GPAAAYGTETYTMGLHTSDGNLLVAKRENAVILQEDNYE 150

Query: 169 TRYAGFNPNSAESYIIFEFMQDKYMEQSVHLASLVQKQFRHTCKRVDRGVHQAGFLVLKA 228
             Y GF+PNS +S+I+F   Q  Y++ S+  A  V+++FR    R  RGV QAGFLVL  
Sbjct: 151 ANYNGFDPNSPQSHILFALHQSAYIDNSLRFAEKVEREFRTKAGRKSRGVKQAGFLVLWK 210

Query: 229 SAMPSILVELGFISTPEEERYLNSEAGANTMAKGIYHAFLNYKREQE 275
           S MPS+L+E GF++ P EE++LN + G + +A GIY AF  YK+E E
Sbjct: 211 SYMPSVLIECGFLTNPTEEKFLNDKTGQSYIASGIYRAFKEYKQELE 257