Pairwise Alignments

Query, 396 a.a., isocitrate dehydrogenase [NADP] (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 419 a.a., Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  466 bits (1199), Expect = e-136
 Identities = 232/408 (56%), Positives = 293/408 (71%), Gaps = 17/408 (4%)

Query: 3   KITMQKDGTLSVPDVPVVPYITGDGVGAEVTPSMQSVVNAAVQKAYGGKRRIEWKEVLAG 62
           KI +  D +L VPD P+VPYI GDG G ++TP M  VV+AAV KAYGG+R+I W EV  G
Sbjct: 13  KIAVNADMSLQVPDEPIVPYIEGDGTGLDITPVMLKVVDAAVAKAYGGRRKIHWMEVYVG 72

Query: 63  ERAFNETGS--WLPDETMKAFQEYLIGIKGPLTTPVGGGIRSLNVALRQTLDLYVCLRPV 120
           ++A    G   WLP ET+ A + +++ IKGPL+TP GG  RSLNVALRQ LDLYVCLRPV
Sbjct: 73  QKATQVYGPDVWLPTETLDALRTHVVSIKGPLSTPAGGPFRSLNVALRQALDLYVCLRPV 132

Query: 121 RWYQGVHSPVKAPEKVNMCVFRENTEDIYAGIEWEAGTPEAEKFYQFLKNEMGVTKVRFP 180
           ++++GV SP+K PEK NM VFREN+EDIYAGIE+EAG+P+A+   + L++EMGVT +RFP
Sbjct: 133 QYFEGVPSPLKEPEKTNMVVFRENSEDIYAGIEYEAGSPQAQSLIRLLQDEMGVTSIRFP 192

Query: 181 ETSSFGVKPVSREGTERLVRAACQYALDHHLPSVTLVHKGNIMKFTEGGFKKWGYELAQR 240
            TS  G+K VS EGTERL+R A QYA+DH  PSVT+VHKGNIM++TEGGF+ W Y LA++
Sbjct: 193 ATSGIGIKTVSMEGTERLMRKAIQYAIDHDKPSVTIVHKGNIMRYTEGGFRDWAYALARK 252

Query: 241 EFGDALADG-------------RLVIKDCIADAFLQNTLLIPEEYSVIATLNLNGDYVSD 287
           EFG  L DG              +VIKDC AD FLQ  LL P ++SV+ATLNLNGDY++D
Sbjct: 253 EFGATLLDGGPWCQFRNPKTGRDIVIKDCFADDFLQQILLRPLDFSVVATLNLNGDYIAD 312

Query: 288 QLAAMVGGIGIAPGANINYKTGHAIFEATHGTAPNIAGKDVVNPCSIILSAVMMLEYLGW 347
            LAA VGGIGIAPGAN++     A FE THG  P  AGKD  NPC+ IL+A MML +LGW
Sbjct: 313 ALAAQVGGIGIAPGANLS--DSLACFEPTHGPVPRFAGKDYANPCAEILAADMMLRHLGW 370

Query: 348 KEAAALIEKALEQSFLDARATHDLARFMPGGTSLSTTAFTREIVERIE 395
           KEAA ++  AL  +    + THD AR M G T +S + F + +++ +E
Sbjct: 371 KEAADVVIAALRSAIGSKQVTHDFARLMAGATQVSCSGFGQVMIDAME 418