Pairwise Alignments

Query, 396 a.a., isocitrate dehydrogenase [NADP] (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 417 a.a., NADP-dependent isocitrate dehydrogenase from Serratia liquefaciens MT49

 Score =  470 bits (1209), Expect = e-137
 Identities = 242/407 (59%), Positives = 293/407 (71%), Gaps = 17/407 (4%)

Query: 3   KITMQKDGTLSVPDVPVVPYITGDGVGAEVTPSMQSVVNAAVQKAYGGKRRIEWKEVLAG 62
           KIT+   G L VP+ P++P+I GDG+G +VTP+M  VV+AAV+KAY G+R+I W E+  G
Sbjct: 13  KITVDAQGKLVVPNNPIIPFIEGDGIGVDVTPAMIHVVDAAVKKAYHGERKISWMEIYTG 72

Query: 63  ERAFNETGS--WLPDETMKAFQEYLIGIKGPLTTPVGGGIRSLNVALRQTLDLYVCLRPV 120
           E++ +  G   WLP+ET+   ++Y + IKGPLTTPVGGGIRSLNVALRQ LDLYVCLRPV
Sbjct: 73  EKSTHVYGKDVWLPEETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQQLDLYVCLRPV 132

Query: 121 RWYQGVHSPVKAPEKVNMCVFRENTEDIYAGIEWEAGTPEAEKFYQFLKNEMGVTKVRFP 180
           R+YQG  SPVK PE  +M +FREN EDIYAGIEW+AG+ EA+K  +FL++EMGV K+RFP
Sbjct: 133 RYYQGTPSPVKQPELTDMVIFRENAEDIYAGIEWKAGSAEADKVIKFLRDEMGVKKIRFP 192

Query: 181 ETSSFGVKPVSREGTERLVRAACQYALDHHLPSVTLVHKGNIMKFTEGGFKKWGYELAQR 240
           E    GVKP S EGT+RLVRAA +YA+ +   SVTLVHKGNIMKFTEG FK WGYELA+ 
Sbjct: 193 EQCGIGVKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEGAFKDWGYELARE 252

Query: 241 EFGDALADG-------------RLVIKDCIADAFLQNTLLIPEEYSVIATLNLNGDYVSD 287
           EFG  L DG              +V+KD IADAFLQ  LL P EY VIA +NLNGDY+SD
Sbjct: 253 EFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVIACMNLNGDYISD 312

Query: 288 QLAAMVGGIGIAPGANINYKTGHAIFEATHGTAPNIAGKDVVNPCSIILSAVMMLEYLGW 347
            LAA VGGIGIAPGANI   +  A+FEATHGTAP  AG+D VNP SIILSA MML ++GW
Sbjct: 313 ALAAQVGGIGIAPGANIG--SDCALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGW 370

Query: 348 KEAAALIEKALEQSFLDARATHDLARFMPGGTSLSTTAFTREIVERI 394
            EAA LI K +E +      T+D  R M G   L  + F   IV+ +
Sbjct: 371 FEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIVKHM 417