Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1041 a.a., cation efflux system protein czcA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  549 bits (1415), Expect = e-160
 Identities = 331/1039 (31%), Positives = 572/1039 (55%), Gaps = 30/1039 (2%)

Query: 2    LNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEEV 61
            ++ I+ +SL N+  +    ++ +IAG  +  HT +D FPD+    V I+T+  G +AEEV
Sbjct: 5    IDNIVAFSLKNKFFIFFCTVIAVIAGAVSFKHTPIDAFPDVTNTKVTIITQWAGRSAEEV 64

Query: 62   EQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSESL 121
            E+ +T P+E A+N       +RS++  G SV+ V F+   D + ARQ V   L      L
Sbjct: 65   EKFITIPIEIAMNPVQKKTDIRSTTLFGLSVINVMFEDRVDDFTARQQVYNLLN--DADL 122

Query: 122  PVNVGKPTLGPQSSILGEMLIVGLTADSTSMLDLRTIADWTIRPRLLSTGGVAQVAVLGG 181
            P  V  P + P     GE+    L +D  S+ DL+TI DW I   L S  GVA +   GG
Sbjct: 123  PEGV-TPEVQPLYGPTGEIYRYTLRSDRRSVRDLKTIQDWVIERNLRSVSGVADIVSFGG 181

Query: 182  DIKEYQIQLDPERMRHYGVSMGEVMAVTQDMNLNANGGVLYEFGNEYIARGVLSTPKVEE 241
            ++K +++ ++P ++ +YG++  E+       N+N  G V+ +    Y+ RG+     ++E
Sbjct: 182  EVKTFEVSVNPHQLINYGITSLELYDAIAKSNINVGGDVITKSSQAYVVRGIGLINDLDE 241

Query: 242  LGKAVVKTVNNFPVTLEDIADVKIG--PKAPKLGTASERG--KPAVLMTVTKQPATSTLE 297
            L   VVK +N  P+ ++++ADV     P+  ++G   E    +  V+M   + P      
Sbjct: 242  LRNIVVKNINGTPILVKNLADVHESCLPRLGQVGRMDENDVVQGIVVMRKGENPGEVIAN 301

Query: 298  LTDKLEASLQDLQKNLPADVKVSTDIFRQSRFIESSIGNVKKSLFEGGIFVVIVLFLFLA 357
            L DK+E   Q++   LP DV++    + +   +  ++  V  +L EG + V  ++ +F+A
Sbjct: 302  LKDKIEELNQNV---LPEDVRI-IPFYDREDLVNLAVKTVTHNLIEGILLVTFIVLIFMA 357

Query: 358  NVRTTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVDDAIVDVENVYKRL 417
            + RTT+I  V +PL+LL + + L  MG++ N +S+G  AI  G ++D A+V VE V+  L
Sbjct: 358  DWRTTVIVAVIIPLALLFAFICLRVMGMSANLLSMG--AIDFGIIIDGAVVMVEGVFVAL 415

Query: 418  RENRQKAEAERFSTLE---VVFNASKEVRMPILNSTLIIVVSFVPLFFLSGMEGRMLVPL 474
             +  ++     F+ +    ++ + +K+    +  S LII+ + +P+F    +EG+M  PL
Sbjct: 416  DKKAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSKLIIITALIPIFSFQKVEGKMFSPL 475

Query: 475  GIAFIVALFASTVVALTLTPVLCSYLLGSNKTNKELK-ESFVARWMKGIYEKALTWVLAH 533
                  AL  + +  LTL PV+ S LL  N   K  +   F+ +    +++       AH
Sbjct: 476  AYTLGFALLGALIFTLTLVPVMSSMLLKKNVREKNNRFVHFINQKCTALFDT----FYAH 531

Query: 534  KRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGSFTINISSLPGISLEESNKMGHRAEEL 593
            +++T+G   V+  + L +F  LG  FLP  NEGS  I  +    ISL+ES  + ++  + 
Sbjct: 532  RKLTIGLATVVAGVGLWLFSFLGTEFLPQLNEGSIYIRATLPQSISLDESVTLANKMRKK 591

Query: 594  LLTIPEIQTVARKTGRAELDEHALGVNVSEI------EAPFELKDRPRSELVAEVREKLG 647
            LLT PE++ V  +TGR      A G    E       E  +E K   + +L+ +++E L 
Sbjct: 592  LLTFPEVRQVLSQTGRPNDGTDATGFYNIEFHVDIYPEKDWESK-LTKLQLIDKMQEDLS 650

Query: 648  TITGANIEIGQPISHRIDAMLSGTKANIAIKLFGDDLNKMFSLGNQIKGAISDIPGIADL 707
               G +    QPI+  ++   SG K +IA+K+FG DL +   L  QI   ++ + GI DL
Sbjct: 651  IYPGIDFNFSQPITDNVEEAASGVKGSIAVKVFGKDLYESEKLAVQIDKILNTVQGIEDL 710

Query: 708  NVEQQIERPQLKIQPKREMLAKFGITLPEFSEYVNVALAGKVISQVYEQGKSFDLIVKVK 767
             V + I +P+L+I+     LA++G+   +    + +A+ GK  S +YE  + F+++V+  
Sbjct: 711  GVIRNIGQPELRIELNERQLARYGVAKEDVQSIIEMAIGGKSASLLYEDERKFNIMVRYS 770

Query: 768  DDARDEMEKIRNLMVDTNDGRKVPLNYVAEVVSSMGPNTINRENVKRKIVISANVADRDL 827
            ++ R   E+I  ++V   DG  VP+  +A++ +  GP  I R+N  R   +  +V  RD+
Sbjct: 771  EEFRQNEEEIGKILVPAMDGTMVPIKELADITTITGPLLIFRDNHARFCAVKFSVRGRDM 830

Query: 828  RSVVNDIQKQVDATIQLPEGYHIEYGGQFESEQAASRVLALTSFMSIVIIFLLLYHEFRS 887
             + V + QK+V+A++ LP GY +++ G FE++Q AS+ LA    +SI IIF++L+  F +
Sbjct: 831  GTAVAEAQKKVNASVHLPAGYSLKWTGDFENQQRASKRLAQVVPISIAIIFIILFILFSN 890

Query: 888  VKESGVILLNLPLALIGGVFALVITTGEVSIPAIIGFISLFGIATRNGMLLISHYNHLQQ 947
             +++G++LLN+P A +GG+ AL+IT    SI A IGFI+LFGI  +NG+++IS      +
Sbjct: 891  ARDAGLVLLNVPFAAVGGIAALLITGFNFSISAGIGFIALFGICIQNGVIMISDIKANLK 950

Query: 948  VEGLNVYDSVVQGSLDRLNPILMTALSSALALIPLALGGDLPGNEIQSPMAKVILGGLLT 1007
            + G  + ++  +G   R+ P++MTA  +A+ L+P A+   + G+E Q P+A VI+GGL+ 
Sbjct: 951  L-GSPLQEATKEGVRSRIRPVIMTAAMAAIGLLPAAMSHGI-GSESQRPLAIVIIGGLIG 1008

Query: 1008 STFLNGFIVPIVYLMMHRQ 1026
            +TF   FI P++  +++ +
Sbjct: 1009 ATFFALFIFPLIVEVVYER 1027