Pairwise Alignments

Query, 175 a.a., conserved hypothetical protein, putative non-specific DNA-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 167 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 50.1 bits (118), Expect = 2e-11
 Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 25/172 (14%)

Query: 11  NIANKAGQKLYYPRLVKFSKMVNTQKMAELIAEKASLTPGDVHNVIRNLMSVMREQLLNS 70
           N A K+    YY +  + S  ++ +++ E I  +++ T  DV   I  ++  ++  L   
Sbjct: 14  NPAKKSEPAKYYAQ-AQASGELDFEELCEAITSRSTCTETDVRAAISGILYEVKRALKAG 72

Query: 71  RTVRLEGLGTFTMIAKAGGKGVVLESKVSSSQIVSLRCQFTPEYTR-------SADGVTT 123
           R  RL  LG+  +   + G   V E   S S I      F P  T        S   V T
Sbjct: 73  RIARLGDLGSLQIGLNSEGAASVKE--FSGSMIKGAHLIFRPGKTLAELMKILSYQQVLT 130

Query: 124 RALTSGVEFVHVKDVAGGFVDDDDKNHSGGGDNPGGGSTPGGDDDEAPDPTV 175
           RA+              G  +D DKN   GGD  G        D+EAPDPTV
Sbjct: 131 RAVAQA-------GAGDGGGEDPDKNPDSGGDGSG--------DEEAPDPTV 167