Pairwise Alignments

Query, 201 a.a., Holliday junction DNA helicase ruvA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 193 a.a., Holliday junction branch migration protein RuvA from Paraburkholderia sabiae LMG 24235

 Score =  110 bits (276), Expect = 1e-29
 Identities = 77/203 (37%), Positives = 113/203 (55%), Gaps = 15/203 (7%)

Query: 1   MIEYVRGELAELSPATAVIDCNGVGYAANISLNTYSAIQGK-KNCKLYIYEAIREDAYVL 59
           MI  + G L E +P   +IDCNGVGY  ++ ++T+  + G  +   L     +REDA++L
Sbjct: 1   MIGRIAGVLLEKNPPHLLIDCNGVGYEVDVPMSTFYNLPGTGEKVVLLTQMIVREDAHLL 60

Query: 60  YGFADKQEREIFLLLISVSGIGGNTARMILSALSPAELVNVISTENANLLKTVKGIGLKT 119
           YGF   QER  F  L+ ++GIG   A  +LS +S  EL   ++ ++A  L  V GIG KT
Sbjct: 61  YGFLTPQERSTFRELLKITGIGARMALAVLSGMSVQELSQTVTMQDAARLTRVPGIGKKT 120

Query: 120 AQRVIVDLKDKIKTMGATVAGGSASAGMLLQSASVEVQEEAVAALTMLGFAAAPSQKVVL 179
           A+R++++LK K   +GA +    A AG   QS   +   + + AL  LG+    S+K  L
Sbjct: 121 AERLLLELKGK---LGADL---GAMAGAASQS---DHASDILNALLALGY----SEKEAL 167

Query: 180 AILKEEP-DAPVEKVIKLALKRL 201
           A +K  P    V + IKLALK L
Sbjct: 168 AAIKNVPAGTGVSEGIKLALKAL 190