Pairwise Alignments

Query, 201 a.a., Holliday junction DNA helicase ruvA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 205 a.a., Holliday junction branch migration protein RuvA from Pectobacterium carotovorum WPP14

 Score =  110 bits (276), Expect = 1e-29
 Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 7/204 (3%)

Query: 1   MIEYVRGELAELSPATAVIDCNGVGYAANISLNT-YSAIQGKKNCKLYIYEAIREDAYVL 59
           MI  +RG + E  P   +I+ NGVGY  ++ +   Y   +  +   ++ +  +REDA +L
Sbjct: 1   MIGRLRGIILEKQPPQVLIEANGVGYEVHMPMTCFYELPELNQEAVIFTHFVVREDAQLL 60

Query: 60  YGFADKQEREIFLLLISVSGIGGNTARMILSALSPAELVNVISTENANLLKTVKGIGLKT 119
           +GF DKQER +F  LI V+G+G   A  ILS +S  + V+ +  E    L  + G+G KT
Sbjct: 61  FGFNDKQERALFRELIKVNGVGPKLALAILSGMSATQFVSAVEREEIGALIKLPGVGKKT 120

Query: 120 AQRVIVDLKDKIKTMGA----TVAGGSASAGMLLQSASVEVQEEAVAALTMLGFAAAPSQ 175
           A+R++V++KD+ K +       V+    ++     S   E + EA AAL  LG+    + 
Sbjct: 121 AERLVVEMKDRFKGLSGDLFNPVSDIPLASPATADSRVGEPEAEAAAALVALGYKPQEAS 180

Query: 176 KVVLAILKEEPDAPVEKVIKLALK 199
           +++  I +  PDA  E +I+ AL+
Sbjct: 181 RMISKIAR--PDADCETLIRDALR 202