Pairwise Alignments

Query, 380 a.a., multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 360 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  188 bits (477), Expect = 2e-52
 Identities = 130/376 (34%), Positives = 198/376 (52%), Gaps = 26/376 (6%)

Query: 8   MKQGLLLLG-CLVAAAGCKQAPPTQMETGYEVMTVSPT--DRMISSAYSATIRGRQDIDI 64
           MK+ L+L+G C +      ++   + E     M  SP   D  ++  Y + I     I++
Sbjct: 1   MKRILMLMGLCALLCNTSCESKKEEKEEKVTFMVTSPMKMDTTVTKDYVSQIHSISHIEL 60

Query: 65  YPQVGGTLTKVSVTEGQRVKSGQTLFIIDQVPYEAALQTAVANVESAKASLATAQLTYDS 124
             Q  G L K+ V EGQ VK GQ LF I    YEA LQ       SA+A +  A + Y +
Sbjct: 61  RAQERGYLQKIFVDEGQTVKKGQLLFQITPTLYEAELQ-------SAQAEVNFADIEYQN 113

Query: 125 KEELYKENVVSAFDLSTAKNSLLAAKAQLAQAKAQEVSARNNLSYTVVKSPADGVVGTLP 184
            ++L   N+VS  +L+ AK  L  AKA+LA AK        +L +T +K+P DG++    
Sbjct: 114 TKKLADSNIVSPNELAMAKAKLDKAKAELALAKV-------HLQFTQIKAPFDGIIDRFH 166

Query: 185 YRVGALVSSSIPEPLTTVSDNSDMYVYFSMTENQLLGLIRQYGSKDEALKSMPAIDLQLN 244
            R+G+LV     E LT +SDNS M+VY+++ E + L   + +  +D A+K    + L + 
Sbjct: 167 VRLGSLVDEG--ELLTNLSDNSKMWVYYNVPEAEYLDY-KSHEKQDSAVK----VKLLMA 219

Query: 245 DKSAYPEQGQIESISGVIDRSTGTVSLRAVFPNKDGLLHSGGAGNVVIPVQKTGALVIPQ 304
           +   +   G +E+I    +  TG +  RA FPN D LL  G  GN+++ V  + AL+IPQ
Sbjct: 220 NNKLFSHPGVVETIEADFNNETGNIPFRATFPNPDRLLRHGETGNILMSVPLSNALLIPQ 279

Query: 305 GATFEIQDKRYVYKV-VDGKAQSSQVQVTRVNGGREFIVDEGLSPGDVIVAEGVGLLREG 363
            ATFE+ DK+YVY V  DG  +S ++ V        + V +GL+ GD  + EG+ L+RE 
Sbjct: 280 KATFEVLDKKYVYVVDKDGVLKSREITVA-AEMPHIYAVQDGLAEGDKFLLEGLRLVREN 338

Query: 364 TPIKAKTAQASTTTTE 379
             I  K  + ST  ++
Sbjct: 339 EKIHYKFVEPSTVLSQ 354