Pairwise Alignments

Query, 380 a.a., multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 385 a.a., anaerobic multidrug efflux transporter, ArcA-regulated from Escherichia coli BL21

 Score =  149 bits (375), Expect = 2e-40
 Identities = 107/374 (28%), Positives = 181/374 (48%), Gaps = 6/374 (1%)

Query: 12  LLLLGCLVAAAGCKQAP-PTQMETGYEVMTVSPTDRMISSAYSATIRGRQDIDIYPQVGG 70
           LL  G ++ A   K A     M     V+T+SP    + S         +  +I PQVGG
Sbjct: 11  LLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYEVAEIRPQVGG 70

Query: 71  TLTKVSVTEGQRVKSGQTLFIIDQVPYEAALQTAVANVESAKASLATAQLTYDSKEELYK 130
            + K +  EG +V  G +L+ ID  P +A L +A  ++  A ++ + A++T++ +  L K
Sbjct: 71  IIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARITFNRQASLLK 130

Query: 131 ENVVSAFDLSTAKNSLLAAKAQLAQAKAQEVSARNNLSYTVVKSPADGVVGTLPYRVGAL 190
            N VS  D  TA+  L  A+A +  AKA    A  NL Y  V SP  GV G     VGAL
Sbjct: 131 TNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVSGKSSVTVGAL 190

Query: 191 VSSSIPEPLTTVSDNSDMYVYFSMTENQLLGLIRQYGS-KDEALKSMPAIDLQLNDKSAY 249
           V+++  + L TV     +YV  + +    L +  +  S + + ++    + L L +   Y
Sbjct: 191 VTANQADSLVTVQRLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPVQLNLENGKRY 250

Query: 250 PEQGQIESISGVIDRSTGTVSLRAVFPNKDGLLHSGGAGNVVIPV-QKTGALVIPQ-GAT 307
            + G ++     +D +TG+V+LRA+FPN +G L  G     ++    +   L++PQ G T
Sbjct: 251 SQTGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVT 310

Query: 308 FEIQDKRYVYKV-VDGKAQSSQVQVTRVNGGREFIVDEGLSPGDVIVAEGVGLLREGTPI 366
              Q K     +  D   Q  +++ ++  G  +++V  GL  GD ++  G+  +R G   
Sbjct: 311 HNAQGKATALILDKDDVVQLREIEASKAIGD-QWVVTSGLQAGDRVIVSGLQRIRPGIKA 369

Query: 367 KAKTAQASTTTTEN 380
           +A ++     +TE+
Sbjct: 370 RAISSSQENASTES 383