Pairwise Alignments

Query, 258 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 316 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  162 bits (409), Expect = 1e-44
 Identities = 95/245 (38%), Positives = 141/245 (57%), Gaps = 11/245 (4%)

Query: 15  LRESGNYGTAHIYRSSMSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSWNTVSTYM 74
           LRE G Y TAH+Y++++ +   F G   + FR+V+++ L+ +E +L       NT+STYM
Sbjct: 17  LREEGRYSTAHVYQNALLSFSKFCGVHSVSFRQVTRDRLRRYEQHLYECGLKPNTISTYM 76

Query: 75  RTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKE 134
           R LR++YNR V+   APYV   F  VYTG    +KRAL    + RL+ E P+     +  
Sbjct: 77  RMLRSIYNRGVEAGSAPYVHRLFHEVYTGVDVRQKRALPVVALRRLLYEDPQ-----SDR 131

Query: 135 LQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKR 194
           L+RT+ +  LMF   G+ F DL +L+K  +D NV+ Y R KT   ++V ++  A +++ +
Sbjct: 132 LRRTQAIAALMFQFCGMSFADLTHLEKSALDSNVLRYNRVKTKTPMSVEVLDSAKEMLDQ 191

Query: 195 YMNTDPASP----YLFSLITSGE--GTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVSS 248
             N     P    YLFS++   +    E AY+EYQ ALR FNY L  L + L L   V+S
Sbjct: 192 LRNRQSPRPGCPDYLFSILQGDKKRKDERAYREYQSALRRFNYCLKSLAKRLRLNFPVTS 251

Query: 249 YTAKH 253
           YT +H
Sbjct: 252 YTLRH 256