Pairwise Alignments

Query, 258 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 308 a.a., putative integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (279), Expect = 1e-29
 Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 5/181 (2%)

Query: 15  LRESGNYGTAHIYRSSMSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSWNTVSTYM 74
           L+  G   T+  Y +++ +  +F     + F ++S + L  +E+YL+ R  S NT+S YM
Sbjct: 122 LKRLGKIRTSETYTAALKSFSSFMKGSDILFGELSSDLLMEYEAYLKNRGNSPNTISFYM 181

Query: 75  RTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKE 134
           R L+AVYNRAV+  L     + F+ VYTG     KRA+   D+ R+ K L   L      
Sbjct: 182 RILKAVYNRAVENGLTGQ-RNLFKSVYTGVEKTLKRAIHLNDIRRI-KRLDLSL---KPH 236

Query: 135 LQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKR 194
           L   R +F   F  RG+ FVD+AYLKK DI   ++TYRR+KTG+ L +       ++IK 
Sbjct: 237 LDFARDMFLFCFYTRGMSFVDMAYLKKGDIANGILTYRRKKTGQQLFIRWEKCMQEIIKL 296

Query: 195 Y 195
           +
Sbjct: 297 F 297