Pairwise Alignments

Query, 258 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 318 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  169 bits (427), Expect = 9e-47
 Identities = 98/245 (40%), Positives = 148/245 (60%), Gaps = 11/245 (4%)

Query: 15  LRESGNYGTAHIYRSSMSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSWNTVSTYM 74
           LR+ G + TAH+Y++++ +   F G+  + FR+V+++ L+ +  +L       NTVSTYM
Sbjct: 20  LRKEGRFSTAHVYQNALFSFNKFCGNASVSFRQVTRDRLRRYGEHLYDSGLKPNTVSTYM 79

Query: 75  RTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKE 134
           R LR++YNR V+   APYV   FR VYTG    +KRAL   ++ RL+ E PK  C     
Sbjct: 80  RMLRSIYNRGVELGSAPYVHGLFRDVYTGVDIRQKRALPVSELRRLLYEDPKTDC----- 134

Query: 135 LQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKR 194
           L+RT+ +  LMF   G+ F DLA+L+K  +D NV+ Y R KT   ++V ++  A +++ +
Sbjct: 135 LRRTQSIAALMFQFCGMSFADLAHLEKSALDCNVLRYNRIKTRTPMSVEVLDTAKEMMNQ 194

Query: 195 YMNTDPASP----YLFSLITSGE--GTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVSS 248
             N+  + P    YLFS+++  +    E AY+EYQ ALR FN  L  L + L LTS V+S
Sbjct: 195 LRNSQSSRPGCPDYLFSILSGDKKRKDERAYREYQSALRRFNNHLKSLARALHLTSPVTS 254

Query: 249 YTAKH 253
           YT +H
Sbjct: 255 YTIRH 259