Pairwise Alignments

Query, 258 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 229 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (280), Expect = 7e-30
 Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 11/170 (6%)

Query: 90  APYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKELQRTRGLFFLMFLLR 149
           APYV   F  VYTG    +K+AL   ++ RL+ E PK     ++ L+RT+ +  LMF   
Sbjct: 6   APYVHRLFHDVYTGVDICQKKALPVGELNRLLYEDPK-----SERLRRTQAIAALMFQFC 60

Query: 150 GIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKRYMNTDPASP----YL 205
           G+ F DLA+L+K  ++ N++ Y R KT   ++V ++  A  +I R  N  P+ P    YL
Sbjct: 61  GMSFADLAHLEKSSLERNIIRYNRIKTKTPMSVEVLDTAQDIISRLRNCQPSHPDCPDYL 120

Query: 206 FSLITSGE--GTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVSSYTAKH 253
           FS++   +    E+AY+EYQ ALR FN +L  L + L LTS V+SYT +H
Sbjct: 121 FSILLGDKKREDESAYREYQSALRRFNNRLKRLAKALRLTSPVTSYTIRH 170