Pairwise Alignments

Query, 258 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 321 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  170 bits (430), Expect = 4e-47
 Identities = 99/245 (40%), Positives = 144/245 (58%), Gaps = 11/245 (4%)

Query: 15  LRESGNYGTAHIYRSSMSAILAFHGSDKLPFRKVSQEFLKSFESYLRGRNCSWNTVSTYM 74
           LR+ G Y TAH+Y +++ +   F G+  + F +V++E L+ +  YL  R    NTVSTYM
Sbjct: 18  LRKEGRYSTAHVYENALLSFRGFCGTPTVSFGQVTREHLRCYGQYLYERGLKLNTVSTYM 77

Query: 75  RTLRAVYNRAVDRHLAPYVPHHFRYVYTGTRADRKRALDKEDMERLMKELPKQLCQDNKE 134
           R LR++YNR V+   APYV   F  VYTG    +K+AL   ++ +L+   PK     +  
Sbjct: 78  RMLRSIYNRGVESGRAPYVHRLFHGVYTGVDVRQKKALPATELHKLLYGDPK-----SDI 132

Query: 135 LQRTRGLFFLMFLLRGIPFVDLAYLKKHDIDGNVMTYRRRKTGRLLTVTLVPEAMKLIKR 194
           L+RT+ +  LMF   G+ F DLA+L+K  +D NV+ Y R KT   ++V ++  A  +I +
Sbjct: 133 LRRTQAIAALMFQFCGMSFADLAHLEKSSLDRNVLHYNRVKTKTPMSVEILDTAKDMIYQ 192

Query: 195 YMNTDPA----SPYLFSLITSGE--GTEAAYKEYQLALRNFNYQLMILKQVLGLTSEVSS 248
             N  PA      YLFS++   +    E+AY+EYQ ALRNFN  L  L + L LTS V+S
Sbjct: 193 LQNRKPALQDCPDYLFSILNGNKKRKDESAYREYQSALRNFNNHLRGLAKALHLTSPVTS 252

Query: 249 YTAKH 253
           YT +H
Sbjct: 253 YTIRH 257