Pairwise Alignments

Query, 326 a.a., Fe3+ ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 327 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  177 bits (448), Expect = 4e-49
 Identities = 114/329 (34%), Positives = 185/329 (56%), Gaps = 19/329 (5%)

Query: 8   LFSILITLTVGLFLLDLAVGAVNIPIRDVWAAL-TGGNCSRATEKIVLNIRLIKAIVALL 66
           + +I + +   L ++D+  G+  +P+  +W AL      +     IV +IRL  A++ALL
Sbjct: 1   MLAIALAMMASL-MVDVTCGSSGLPLSALWQALFQPEKVNAGIHVIVWDIRLPYALMALL 59

Query: 67  AGAALSVSGLQMQTLFRNPLAGPYVLGISSGASLGVALVVLAGIGSSIGIAGAAWVGA-- 124
            G AL ++G +MQT+  NPLA P+ LG+SS A+ G AL ++ GIG   GI  A ++ A  
Sbjct: 60  VGMALGLAGAEMQTILNNPLATPFTLGVSSAAAFGAALAIVLGIGIP-GIPAAWFIPANA 118

Query: 125 -------AVVLLVITAVGQRIKDIMVILILGMMFSSGVGAVVQILQYLSKEESLKAFVIW 177
                  A++L  IT         +V+  + ++F+    A+V I+Q+++ E++L+  V W
Sbjct: 119 FIFALLSALLLDGITRWTGVAASGVVLFGIALVFT--FNALVAIMQFVADEDTLQGLVFW 176

Query: 178 TMGALGDVTSGQLLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIRRSRSLLFL 237
           TMG+L   +  +L +L     A L  A+ +   L  L  GEE A++ G+++RR R L  L
Sbjct: 177 TMGSLVRASWEKLGVLAVVFIAVLFCALRSAWQLTALRLGEERAMSFGIHVRRLRLLSLL 236

Query: 238 STTLLAGTITAFCGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGASILLLCDIISKI 297
             +LL+    AF GPIGFIGL  PH+ R+L    DH   LPG++L G  +L L  I +K 
Sbjct: 237 RISLLSALAVAFVGPIGFIGLVAPHIARILL-GEDHRFYLPGSVLIGGLVLSLASIAAKN 295

Query: 298 ----FTLPINAITALLGIPIVVWVVLRNK 322
                 +P+  +T+L+G+P  + +VLR++
Sbjct: 296 SIPGVMVPVGIVTSLVGVPFFLSIVLRHR 324