Pairwise Alignments

Query, 409 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 380 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 16/260 (6%)

Query: 156 DLVFGQLNEQF---IRDYQDFILLEKG---YAVDTLRGYLAILKKICRIAYKEGHSEKYH 209
           + +F ++++ F   +R Y D     K     ++++   Y    K   R A+ EG+    +
Sbjct: 129 NFLFDEVDDSFTKRVRRYFDEKARTKSDLPLSMNSKYSYFNKFKACLRSAFDEGYLNINY 188

Query: 210 FCHFKLPKQKETTPKALSRENFEKLRDLEIPEKRRSHVITRDLFLFACYTGTAYADAVSI 269
               K  +Q E+  + L+    + L + +   K     + +  FLF+C TG  ++D  ++
Sbjct: 189 AARVKSFEQAESQREYLTFSELQALTNTQCKYK-----VLKKAFLFSCLTGLRWSDINNL 243

Query: 270 TRKNLFRDDEGSLWLKYQRKKTDYLGRVKLLPEAVALIEKYRDDTRETLFPPQDYHTLRA 329
           T   +  +D+ +  + +++KKTD +  + +  +A  L+ + R    + +F    Y  +  
Sbjct: 244 TWSEVRDEDDNTFRVNFRQKKTDGVEYLYISKQARDLLGE-RQTPHDRVFYGLKYSAVYN 302

Query: 330 NMKSLRLM--AGLSQDLVYHMGRHSFASLVTLEEGVPIETICKMLGHSNIKTTQIYARVT 387
           N + +R    AG+ + + +H  RH+ A L+ LE G  + T+ K LGH  IKTT IYA++ 
Sbjct: 303 N-EIVRWCNRAGVFKHITFHSARHTNAVLL-LENGADLYTVQKRLGHKEIKTTAIYAKIV 360

Query: 388 PKKLFEDMDRFVEATRDLKL 407
            +K+ E          ++KL
Sbjct: 361 DEKMRESAHIIPNLELNIKL 380