Pairwise Alignments

Query, 409 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 228 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  140 bits (353), Expect = 4e-38
 Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 8/187 (4%)

Query: 230 NFEKLRDLEIPEKRRSHVI----TRDLFLFACYTGTAYADAVSITRKNLFRDDEGSLWLK 285
           +F    +LE  E +   ++     RDLF+F+CYTG AY DA+++T  N+    +G  WL 
Sbjct: 38  DFLNHEELEAVENKDFKIVRLQWVRDLFVFSCYTGLAYIDAMNLTPSNITIGIDGEYWLS 97

Query: 286 YQRKKTDYLGRVKLLPEAVALIEKYRDDTRE----TLFPPQDYHTLRANMKSLRLMAGLS 341
             R+KTD   RV +LP+A  +IEKYR   R     ++FP      L + +K +  + G+ 
Sbjct: 98  TCRQKTDQPVRVPILPKAWEIIEKYRTHPRALQKGSVFPMISNQKLNSYLKEIADLCGIE 157

Query: 342 QDLVYHMGRHSFASLVTLEEGVPIETICKMLGHSNIKTTQIYARVTPKKLFEDMDRFVEA 401
           ++L +H+ RH+FA+ VTL  GVP+ET+ KMLGHS I TTQ+YA+V  KK+ EDM    E 
Sbjct: 158 KNLTFHLARHTFATTVTLCNGVPLETVSKMLGHSKITTTQVYAKVVEKKVREDMHTLREK 217

Query: 402 TRDLKLI 408
               KL+
Sbjct: 218 LAAPKLM 224